RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 AGXT2Q9BYV1 514 aa18.43■□□□□ 0.54
CDPF1-204ENST00000404744 SYNPO2Q9UMS6 1093 aa18.43■□□□□ 0.54
CDPF1-204ENST00000404744 KLF18A0A0U1RQI7 1052 aa18.42■□□□□ 0.54
CDPF1-204ENST00000404744 C19orf81C9J6K1 198 aa18.42■□□□□ 0.54
CDPF1-204ENST00000404744 TOB2Q14106 344 aaPredicted RBP18.42■□□□□ 0.54
CDPF1-204ENST00000404744 ZYXQ15942 572 aaKnown RBP18.42■□□□□ 0.54
CDPF1-204ENST00000404744 RGMBQ6NW40 437 aa18.42■□□□□ 0.54
CDPF1-204ENST00000404744 SENP2Q9HC62 589 aa18.42■□□□□ 0.54
CDPF1-204ENST00000404744 AFG3L2Q9Y4W6 797 aa18.42■□□□□ 0.54
CDPF1-204ENST00000404744 GREB1LQ9C091 1923 aaPredicted RBP18.42■□□□□ 0.54
CDPF1-204ENST00000404744 OTOFQ9HC10 1997 aa18.42■□□□□ 0.54
CDPF1-204ENST00000404744 A0A1W2PRG0 241 aa18.41■□□□□ 0.54
CDPF1-204ENST00000404744 BACE1P56817 501 aa18.41■□□□□ 0.54
CDPF1-204ENST00000404744 MTMR2Q13614 643 aa18.41■□□□□ 0.54
CDPF1-204ENST00000404744 PAXIP1Q6ZW49 1069 aaPredicted RBP18.41■□□□□ 0.54
CDPF1-204ENST00000404744 ZNF654Q8IZM8 581 aa18.41■□□□□ 0.54
CDPF1-204ENST00000404744 NUP133Q8WUM0 1156 aa18.41■□□□□ 0.54
CDPF1-204ENST00000404744 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
CDPF1-204ENST00000404744 WNK4Q96J92 1243 aa18.41■□□□□ 0.54
CDPF1-204ENST00000404744 LARP6Q9BRS8 491 aaKnown RBP18.41■□□□□ 0.54
CDPF1-204ENST00000404744 KIAA1683Q9H0B3 1180 aa18.41■□□□□ 0.54
CDPF1-204ENST00000404744 CREBZFQ9NS37 354 aa18.41■□□□□ 0.54
CDPF1-204ENST00000404744 TMOD4Q9NZQ9 345 aa18.41■□□□□ 0.54
CDPF1-204ENST00000404744 F5H6K3 240 aa18.4■□□□□ 0.54
CDPF1-204ENST00000404744 CXCL11O14625 94 aa18.4■□□□□ 0.54
CDPF1-204ENST00000404744 ZBTB43O43298 467 aa18.4■□□□□ 0.54
CDPF1-204ENST00000404744 CALM1P0DP23 149 aa18.4■□□□□ 0.54
CDPF1-204ENST00000404744 CALM2P0DP24 149 aa18.4■□□□□ 0.54
CDPF1-204ENST00000404744 CALM3P0DP25 149 aa18.4■□□□□ 0.54
CDPF1-204ENST00000404744 KLRC3Q07444 240 aa18.4■□□□□ 0.54
CDPF1-204ENST00000404744 SLFN13Q68D06 897 aa18.4■□□□□ 0.54
CDPF1-204ENST00000404744 USP17L2Q6R6M4 530 aa18.4■□□□□ 0.54
CDPF1-204ENST00000404744 ISY1Q9ULR0 285 aaKnown RBP18.4■□□□□ 0.54
CDPF1-204ENST00000404744 LIMCH1Q9UPQ0 1083 aa18.4■□□□□ 0.54
CDPF1-204ENST00000404744 IRF6O14896 467 aa18.39■□□□□ 0.54
CDPF1-204ENST00000404744 DDAH1O94760 285 aa18.39■□□□□ 0.54
CDPF1-204ENST00000404744 GMCL1P1Q8NEA9 526 aa18.39■□□□□ 0.54
CDPF1-204ENST00000404744 CCDC102AQ96A19 550 aa18.39■□□□□ 0.54
CDPF1-204ENST00000404744 CHMP4CQ96CF2 233 aa18.39■□□□□ 0.54
CDPF1-204ENST00000404744 ZNF274Q96GC6 653 aaPredicted RBP18.39■□□□□ 0.54
CDPF1-204ENST00000404744 HHIPL1Q96JK4 782 aa18.39■□□□□ 0.54
CDPF1-204ENST00000404744 VCPKMTQ9H867 229 aa18.39■□□□□ 0.54
CDPF1-204ENST00000404744 GOLGA8BA8MQT2 603 aa18.39■□□□□ 0.53
CDPF1-204ENST00000404744 ZBTB48P10074 688 aaPredicted RBP18.39■□□□□ 0.53
CDPF1-204ENST00000404744 MKRN3Q13064 507 aaKnown RBP18.39■□□□□ 0.53
CDPF1-204ENST00000404744 SNAPC2Q13487 334 aa18.39■□□□□ 0.53
CDPF1-204ENST00000404744 APOA5Q6Q788 366 aa18.39■□□□□ 0.53
CDPF1-204ENST00000404744 MICU3Q86XE3 530 aa18.39■□□□□ 0.53
CDPF1-204ENST00000404744 CTCFLQ8NI51 663 aaPredicted RBP18.39■□□□□ 0.53
CDPF1-204ENST00000404744 ZSCAN31Q96LW9 406 aaPredicted RBP18.39■□□□□ 0.53
CDPF1-204ENST00000404744 MYL10Q9BUA6 226 aa18.39■□□□□ 0.53
CDPF1-204ENST00000404744 BRPF3Q9ULD4 1205 aa18.39■□□□□ 0.53
CDPF1-204ENST00000404744 SLC1A4P43007 532 aa18.38■□□□□ 0.53
CDPF1-204ENST00000404744 METAP2P50579 478 aaKnown RBP eCLIP18.38■□□□□ 0.53
CDPF1-204ENST00000404744 GTF2A2P52657 109 aa18.38■□□□□ 0.53
CDPF1-204ENST00000404744 HMGCS2P54868 508 aa18.38■□□□□ 0.53
CDPF1-204ENST00000404744 EVCP57679 992 aa18.38■□□□□ 0.53
CDPF1-204ENST00000404744 SPRYD7Q5W111 196 aa18.38■□□□□ 0.53
CDPF1-204ENST00000404744 HSCBQ8IWL3 235 aa18.38■□□□□ 0.53
CDPF1-204ENST00000404744 LPAR1Q92633 364 aa18.38■□□□□ 0.53
CDPF1-204ENST00000404744 SLKQ9H2G2 1235 aaPredicted RBP18.38■□□□□ 0.53
CDPF1-204ENST00000404744 TPCN1Q9ULQ1 816 aa18.38■□□□□ 0.53
CDPF1-204ENST00000404744 KCNH4Q9UQ05 1017 aa18.38■□□□□ 0.53
CDPF1-204ENST00000404744 GOLGA8AA7E2F4 631 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 NDUFB10O96000 172 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 PDIA3P30101 505 aaKnown RBP18.37■□□□□ 0.53
CDPF1-204ENST00000404744 KIF5BP33176 963 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 STK3Q13188 491 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 CCDC96Q2M329 555 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 DEFB115Q30KQ5 88 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 SH3D19Q5HYK7 790 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 GADL1Q6ZQY3 521 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 FASTKD5Q7L8L6 764 aaKnown RBP18.37■□□□□ 0.53
CDPF1-204ENST00000404744 RAB11FIP4Q86YS3 637 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 RASAL3Q86YV0 1011 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 SPICE1Q8N0Z3 855 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 DCAF4Q8WV16 495 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 TSHZ2Q9NRE2 1034 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
CDPF1-204ENST00000404744 PARP1P09874 1014 aaKnown RBP18.36■□□□□ 0.53
CDPF1-204ENST00000404744 PDHBP11177 359 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 RXRAP19793 462 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 GJA5P36382 358 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 ANP32AP39687 249 aaKnown RBP18.36■□□□□ 0.53
CDPF1-204ENST00000404744 RCAN1P53805 252 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 TROAPQ12815 778 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 GRM1Q13255 1194 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 CCDC144CPQ8IYA2 1237 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 SNX21Q969T3 373 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 GMCL1Q96IK5 515 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 MAP3K14Q99558 947 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 SH2B1Q9NRF2 756 aaPredicted RBP18.36■□□□□ 0.53
CDPF1-204ENST00000404744 EMILIN3Q9NT22 766 aa18.36■□□□□ 0.53
CDPF1-204ENST00000404744 A0A0G2JLL6 359 aaPredicted RBP18.35■□□□□ 0.53
CDPF1-204ENST00000404744 CCDC196A0A1B0GTZ2 297 aa18.35■□□□□ 0.53
CDPF1-204ENST00000404744 WDR46O15213 610 aaKnown RBP18.35■□□□□ 0.53
CDPF1-204ENST00000404744 SLC10A3P09131 477 aa18.35■□□□□ 0.53
CDPF1-204ENST00000404744 CETPP11597 493 aa18.35■□□□□ 0.53
CDPF1-204ENST00000404744 BMP3P12645 472 aa18.35■□□□□ 0.53
CDPF1-204ENST00000404744 GNAQP50148 359 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms