RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 VGLL3A8MV65 326 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 XBP1P17861 261 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 ERCC3P19447 782 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 NLRP5P59047 1200 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 FILIP1LQ4L180 1135 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 CHP1Q99653 195 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 FUT8Q9BYC5 575 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 MFAP3LO75121 409 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 KLRK1P26718 216 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 TXLNAP40222 546 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 ERVK-24P63145 666 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 SEC23AQ15436 765 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 RNF41Q9H4P4 317 aaPredicted RBP13.57□□□□□ -0.24
RBM39-206ENST00000403542 AATFQ9NY61 560 aaKnown RBP eCLIP13.57□□□□□ -0.24
RBM39-206ENST00000403542 HDAC6Q9UBN7 1215 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 XDHP47989 1333 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 GOLGA6L9A6NEM1 432 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 KANK3Q6NY19 840 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 RGS22Q8NE09 1264 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 MTRQ99707 1265 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 VPS18Q9P253 973 aa13.57□□□□□ -0.24
RBM39-206ENST00000403542 ERCC5P28715 1186 aaPredicted RBP13.56□□□□□ -0.24
RBM39-206ENST00000403542 ATP6V1AP38606 617 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 ZNF34Q8IZ26 560 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 SRBD1Q8N5C6 995 aaKnown RBP13.56□□□□□ -0.24
RBM39-206ENST00000403542 PHF20Q9BVI0 1012 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 ANKZF1Q9H8Y5 726 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 TFCP2L1Q9NZI6 479 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 ZMYND10O75800 440 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 KRT9P35527 623 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 IL17AQ16552 155 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 TMTC2Q8N394 836 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
RBM39-206ENST00000403542 NOA1Q8NC60 698 aaKnown RBP13.56□□□□□ -0.24
RBM39-206ENST00000403542 SPATA20Q8TB22 786 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 RABGGTAQ92696 567 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 CAPZA3Q96KX2 299 aa13.56□□□□□ -0.24
RBM39-206ENST00000403542 RNF26Q9BY78 433 aaPredicted RBP13.56□□□□□ -0.24
RBM39-206ENST00000403542 SRGAP2O75044 1071 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 TPM1P09493 284 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 GNAT2P19087 354 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
RBM39-206ENST00000403542 UBXN1Q04323 297 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 JAKMIP3Q5VZ66 844 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 SRGAP1Q7Z6B7 1085 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 SLC51AQ86UW1 340 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 IQCA1Q86XH1 822 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 TRIML1Q8N9V2 468 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 NELFBQ8WX92 580 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 ABCB6Q9NP58 842 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 CTAGE9A4FU28 777 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 CCDC152Q4G0S7 254 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 PANX2Q96RD6 677 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 CPVLQ9H3G5 476 aa13.55□□□□□ -0.24
RBM39-206ENST00000403542 VSNL1P62760 191 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 TROAPQ12815 778 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 CCDC102AQ96A19 550 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 ECM29Q5VYK3 1845 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 EXOC5O00471 708 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 CRKLP46109 303 aaKnown RBP13.54□□□□□ -0.24
RBM39-206ENST00000403542 FUT2Q10981 343 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 NPY5RQ15761 445 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 CDKAL1Q5VV42 579 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 RASGRP2Q7LDG7 609 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 ZNF384Q8TF68 577 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 CDC23Q9UJX2 597 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 ADAM21Q9UKJ8 722 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 KCNJ18B7U540 433 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 MYO1BO43795 1136 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 PMS1P54277 932 aaKnown RBP13.54□□□□□ -0.24
RBM39-206ENST00000403542 MRPS25P82663 173 aaKnown RBP13.54□□□□□ -0.24
RBM39-206ENST00000403542 KCNJ12Q14500 433 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 PLEKHA4Q9H4M7 779 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 ABHD10Q9NUJ1 306 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 CALCOCO1Q9P1Z2 691 aa13.54□□□□□ -0.24
RBM39-206ENST00000403542 ZNF142P52746 1687 aaPredicted RBP13.53□□□□□ -0.24
RBM39-206ENST00000403542 PNPLA7Q6ZV29 1317 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
RBM39-206ENST00000403542 PRCPP42785 496 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 CTR9Q6PD62 1173 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 IQUBQ8NA54 791 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 CTCFLQ8NI51 663 aaPredicted RBP13.53□□□□□ -0.24
RBM39-206ENST00000403542 GSDMAQ96QA5 445 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 MYH2Q9UKX2 1941 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 ANKRD65E5RJM6 399 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 IL6STP40189 918 aaPredicted RBP13.53□□□□□ -0.24
RBM39-206ENST00000403542 COPB1P53618 953 aaKnown RBP13.53□□□□□ -0.24
RBM39-206ENST00000403542 PAK1Q13153 545 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 CNGA4Q8IV77 575 aa13.53□□□□□ -0.24
RBM39-206ENST00000403542 RIOK1Q9BRS2 568 aaKnown RBP13.53□□□□□ -0.24
RBM39-206ENST00000403542 SLIT2O94813 1529 aa13.52□□□□□ -0.24
RBM39-206ENST00000403542 TSPY2A6NKD2 308 aa13.52□□□□□ -0.24
RBM39-206ENST00000403542 PBX1P40424 430 aa13.52□□□□□ -0.24
RBM39-206ENST00000403542 KLK7P49862 253 aa13.52□□□□□ -0.24
RBM39-206ENST00000403542 SH3RF1Q7Z6J0 888 aa13.52□□□□□ -0.24
RBM39-206ENST00000403542 ZNF335Q9H4Z2 1342 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms