RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 CTCFLQ8NI51 663 aaPredicted RBP12.96□□□□□ -0.34
C4orf3-201ENST00000399075 PAGE5Q96GU1 130 aa12.96□□□□□ -0.34
C4orf3-201ENST00000399075 BAG1Q99933 345 aaPredicted RBP12.96□□□□□ -0.34
C4orf3-201ENST00000399075 DCP1AQ9NPI6 582 aaPredicted RBP12.96□□□□□ -0.34
C4orf3-201ENST00000399075 A0A087X0B3 334 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 WTIPA6NIX2 430 aaPredicted RBP12.95□□□□□ -0.34
C4orf3-201ENST00000399075 NR1I3Q14994 352 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 ELF2Q15723 593 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 KMT5BQ4FZB7 885 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 TTC38Q5R3I4 469 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 SPATA1Q5VX52 437 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 TC2NQ8N9U0 490 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 SYMPKQ92797 1274 aaKnown RBP12.95□□□□□ -0.34
C4orf3-201ENST00000399075 DHX58Q96C10 678 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 PRDM1O75626 825 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 RPS8P62241 208 aaKnown RBP12.95□□□□□ -0.34
C4orf3-201ENST00000399075 DPYDQ12882 1025 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 CUL4BQ13620 913 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 EPSTI1Q96J88 318 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 GTPBP4Q9BZE4 634 aaKnown RBP12.95□□□□□ -0.34
C4orf3-201ENST00000399075 PPP2R2CQ9Y2T4 447 aa12.95□□□□□ -0.34
C4orf3-201ENST00000399075 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
C4orf3-201ENST00000399075 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
C4orf3-201ENST00000399075 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
C4orf3-201ENST00000399075 KCNQ2O43526 872 aa12.94□□□□□ -0.34
C4orf3-201ENST00000399075 SCG2P13521 617 aa12.94□□□□□ -0.34
C4orf3-201ENST00000399075 HIBADHP31937 336 aaKnown RBP12.94□□□□□ -0.34
C4orf3-201ENST00000399075 CDKAL1Q5VV42 579 aa12.94□□□□□ -0.34
C4orf3-201ENST00000399075 APTXQ7Z2E3 356 aaKnown RBP12.94□□□□□ -0.34
C4orf3-201ENST00000399075 SRBD1Q8N5C6 995 aaKnown RBP12.94□□□□□ -0.34
C4orf3-201ENST00000399075 SYNRGQ9UMZ2 1314 aa12.94□□□□□ -0.34
C4orf3-201ENST00000399075 VWA3AA6NCI4 1184 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 KIF20AO95235 890 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 PFKFB3Q16875 520 aaPredicted RBP12.93□□□□□ -0.34
C4orf3-201ENST00000399075 TBC1D9BQ66K14 1250 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 FBXO38Q6PIJ6 1188 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 PANX2Q96RD6 677 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 SAMSN1Q9NSI8 373 aaKnown RBP12.93□□□□□ -0.34
C4orf3-201ENST00000399075 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 DNAI1Q9UI46 699 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 H2AFXP16104 143 aaPredicted RBP12.93□□□□□ -0.34
C4orf3-201ENST00000399075 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 NLRP3Q96P20 1036 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 CTAGE1Q96RT6 745 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 FAM53CQ9NYF3 392 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 KIF5BP33176 963 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 E2F4Q16254 413 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 SH3GLB2Q9NR46 395 aa12.93□□□□□ -0.34
C4orf3-201ENST00000399075 IRS2Q9Y4H2 1338 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 hCG_1642624A0A1W2PR95 340 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 WNT7AO00755 349 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 KLRK1P26718 216 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 CALML3P27482 149 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 PBX1P40424 430 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 PTGDRQ13258 359 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 SPTY2D1Q68D10 685 aaPredicted RBP12.92□□□□□ -0.34
C4orf3-201ENST00000399075 IQUBQ8NA54 791 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 ANKS1AQ92625 1134 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 NAA15Q9BXJ9 866 aaKnown RBP12.92□□□□□ -0.34
C4orf3-201ENST00000399075 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.92□□□□□ -0.34
C4orf3-201ENST00000399075 V9GYY5 206 aaPredicted RBP12.92□□□□□ -0.34
C4orf3-201ENST00000399075 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 GOLGA8FQ08AF8 430 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 GOLGA8DPQ0D2H9 430 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 ZNF174Q15697 407 aa12.92□□□□□ -0.34
C4orf3-201ENST00000399075 ARL6IP4Q66PJ3 421 aaKnown RBP12.92□□□□□ -0.34
C4orf3-201ENST00000399075 PPP1R3GB7ZBB8 358 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
C4orf3-201ENST00000399075 AFMP43652 599 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 HSP90AA4PQ58FG1 418 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
C4orf3-201ENST00000399075 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 AKR1B15C9JRZ8 316 aaPredicted RBP12.91□□□□□ -0.34
C4orf3-201ENST00000399075 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 PRDX5P30044 214 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 NLRP5P59047 1200 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 CCDC178Q5BJE1 867 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 DGKHQ86XP1 1220 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 FAM177A1Q8N128 213 aaPredicted RBP12.91□□□□□ -0.34
C4orf3-201ENST00000399075 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 ITIH6Q6UXX5 1313 aa12.91□□□□□ -0.34
C4orf3-201ENST00000399075 FANCGO15287 622 aa12.9□□□□□ -0.34
C4orf3-201ENST00000399075 IRX5P78411 483 aaPredicted RBP12.9□□□□□ -0.34
C4orf3-201ENST00000399075 GABPB1Q06547 395 aaPredicted RBP12.9□□□□□ -0.34
C4orf3-201ENST00000399075 ERCC6LQ2NKX8 1250 aa12.9□□□□□ -0.34
C4orf3-201ENST00000399075 NOM1Q5C9Z4 860 aaKnown RBP12.9□□□□□ -0.34
C4orf3-201ENST00000399075 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
C4orf3-201ENST00000399075 XDHP47989 1333 aa12.9□□□□□ -0.34
C4orf3-201ENST00000399075 TSPY2A6NKD2 308 aa12.9□□□□□ -0.34
C4orf3-201ENST00000399075 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
C4orf3-201ENST00000399075 NMT2O60551 498 aa12.9□□□□□ -0.34
C4orf3-201ENST00000399075 TPM1P09493 284 aa12.9□□□□□ -0.34
C4orf3-201ENST00000399075 LONP1P36776 959 aaKnown RBP12.9□□□□□ -0.34
C4orf3-201ENST00000399075 ADKP55263 362 aaKnown RBP12.9□□□□□ -0.34
C4orf3-201ENST00000399075 FAM193AP78312 1265 aa12.9□□□□□ -0.34
C4orf3-201ENST00000399075 PTPN21Q16825 1174 aa12.9□□□□□ -0.34
C4orf3-201ENST00000399075 FAM47AQ5JRC9 791 aa12.9□□□□□ -0.34
C4orf3-201ENST00000399075 BICDL1Q6ZP65 573 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms