RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 TSGA10IPQ3SY00 556 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 CREB3L3Q68CJ9 461 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 STOX1Q6ZVD7 989 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 LPAR1Q92633 364 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 VCPKMTQ9H867 229 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 TOMM22Q9NS69 142 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 ADGRA2Q96PE1 1338 aa12.34□□□□□ -0.43
CYCSP55-201ENST00000399027 NMT2O60551 498 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 KDM4AO75164 1064 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 VCAM1P19320 739 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 PABPC4Q13310 644 aaKnown RBP eCLIP12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 CRHR2Q13324 411 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 TAF1CQ15572 869 aaPredicted RBP12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 KIAA1755Q5JYT7 1200 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 GMCL1P1Q8NEA9 526 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 NCOA7Q8NI08 942 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 KCNB2Q92953 911 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 TTC14Q96N46 770 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 ZFYVE28Q9HCC9 887 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.44
CYCSP55-201ENST00000399027 CASP8AP2Q9UKL3 1982 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 ZSWIM8A7E2V4 1837 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 WDR46O15213 610 aaKnown RBP12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 TLR2O60603 784 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 TBC1D8O95759 1140 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 HSPA8P11142 646 aaKnown RBP12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 HSPA4P34932 840 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 TRDNQ13061 729 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 ZYXQ15942 572 aaKnown RBP12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 CCDC178Q5BJE1 867 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 RCSD1Q6JBY9 416 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 CYB5R4Q7L1T6 521 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 DGKHQ86XP1 1220 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 MB21D2Q8IYB1 491 aaPredicted RBP12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 ANKS1AQ92625 1134 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 PARK7Q99497 189 aaKnown RBP12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 PNMA3Q9UL41 463 aa12.32□□□□□ -0.44
CYCSP55-201ENST00000399027 USP17L15C9J2P7 530 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 USP17L13C9JLJ4 530 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 USP17L11C9JVI0 530 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 USP17L18D6R9N7 530 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 USP17L22D6RA61 530 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 USP17L17D6RBQ6 530 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 USP17L19D6RCP7 530 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 USP17L20D6RJB6 530 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 F5H6K3 240 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 EIF5BO60841 1220 aaKnown RBP12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 OSBPP22059 807 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 CTCFP49711 727 aaPredicted RBP12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 ATP2B2Q01814 1243 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 KLRC3Q07444 240 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 USP17L24Q0WX57 530 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 CATSPERGQ6ZRH7 1159 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 IQCA1Q86XH1 822 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 ZSCAN10Q96SZ4 725 aaPredicted RBP12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 MTA3Q9BTC8 594 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 USP26Q9BXU7 913 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 ASCC2Q9H1I8 757 aaPredicted RBP12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 R3HDMLQ9H3Y0 253 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 STX8Q9UNK0 236 aa12.31□□□□□ -0.44
CYCSP55-201ENST00000399027 GPR25O00155 361 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 CYP2C8P10632 490 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 TOP1P11387 765 aaKnown RBP12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 SEC23AQ15436 765 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 C8orf34Q49A92 452 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 C17orf99Q6UX52 265 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 LBX2Q6XYB7 198 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 RALYLQ86SE5 291 aaKnown RBP12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 LRRC47Q8N1G4 583 aaKnown RBP12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 TMEM47Q9BQJ4 181 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 ZKSCAN3Q9BRR0 538 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 RPAP3Q9H6T3 665 aaPredicted RBP12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 TSKSQ9UJT2 592 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 TNKSO95271 1327 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 MYPNQ86TC9 1320 aa12.3□□□□□ -0.44
CYCSP55-201ENST00000399027 NDUFB10O96000 172 aa12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 BCRP11274 1271 aa12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 ANTXR2P58335 489 aa12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 KRT32Q14532 448 aa12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 SPICE1Q8N0Z3 855 aa12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 ENAHQ8N8S7 591 aaPredicted RBP12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 GMCL1Q96IK5 515 aa12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 UBAC1Q9BSL1 405 aa12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 PLXNB2O15031 1838 aa12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 MYH6P13533 1939 aa12.29□□□□□ -0.44
CYCSP55-201ENST00000399027 SNHG28P0DPA3 235 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 MCM5P33992 734 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 GCLCP48506 637 aaPredicted RBP12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 LBX1P52954 281 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 HERVK_113P62684 666 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 COG2Q14746 738 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 ADCK5Q3MIX3 580 aa12.28□□□□□ -0.44
CYCSP55-201ENST00000399027 SMCR8Q8TEV9 937 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms