RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 TMTC3Q6ZXV5 915 aa14.88□□□□□ -0.03
PRAME-201ENST00000398741 NAA15Q9BXJ9 866 aaKnown RBP14.88□□□□□ -0.03
PRAME-201ENST00000398741 DUOX1Q9NRD9 1551 aa14.88□□□□□ -0.03
PRAME-201ENST00000398741 AFF2P51816 1311 aa14.88□□□□□ -0.03
PRAME-201ENST00000398741 TEX33O43247 280 aa14.88□□□□□ -0.03
PRAME-201ENST00000398741 CD44P16070 742 aaKnown RBP14.88□□□□□ -0.03
PRAME-201ENST00000398741 MAP3K9P80192 1104 aa14.88□□□□□ -0.03
PRAME-201ENST00000398741 CUL4BQ13620 913 aa14.88□□□□□ -0.03
PRAME-201ENST00000398741 KARSQ15046 597 aaKnown RBP14.88□□□□□ -0.03
PRAME-201ENST00000398741 CTR9Q6PD62 1173 aa14.88□□□□□ -0.03
PRAME-201ENST00000398741 FHOD1Q9Y613 1164 aa14.88□□□□□ -0.03
PRAME-201ENST00000398741 THSD7AQ9UPZ6 1657 aa14.87□□□□□ -0.03
PRAME-201ENST00000398741 SOWAHDA6NJG2 315 aa14.87□□□□□ -0.03
PRAME-201ENST00000398741 PNMA6AP0CW24 399 aaPredicted RBP14.87□□□□□ -0.03
PRAME-201ENST00000398741 NLRP5P59047 1200 aa14.87□□□□□ -0.03
PRAME-201ENST00000398741 SMYD4Q8IYR2 804 aaPredicted RBP14.87□□□□□ -0.03
PRAME-201ENST00000398741 CCDC12Q8WUD4 166 aaPredicted RBP14.87□□□□□ -0.03
PRAME-201ENST00000398741 CPLX3Q8WVH0 158 aa14.87□□□□□ -0.03
PRAME-201ENST00000398741 MRFAP1Q9Y605 127 aa14.87□□□□□ -0.03
PRAME-201ENST00000398741 COL1A1P02452 1464 aaPredicted RBP14.87□□□□□ -0.03
PRAME-201ENST00000398741 CICQ96RK0 1608 aaPredicted RBP14.87□□□□□ -0.03
PRAME-201ENST00000398741 USP17L12C9JPN9 530 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 USP17L21D6R901 530 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 SEMA3EO15041 775 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 ATP2C1P98194 919 aaPredicted RBP14.86□□□□□ -0.03
PRAME-201ENST00000398741 RBL2Q08999 1139 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 PTGDRQ13258 359 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 IQUBQ8NA54 791 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 BSDC1Q9NW68 430 aaPredicted RBP14.86□□□□□ -0.03
PRAME-201ENST00000398741 CNTNAP5Q8WYK1 1306 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 WNT7AO00755 349 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 FGRP09769 529 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 MTF1Q14872 753 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 ERFEQ4G0M1 354 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 TEX35Q5T0J7 233 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 CDKAL1Q5VV42 579 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 APTXQ7Z2E3 356 aaKnown RBP14.86□□□□□ -0.03
PRAME-201ENST00000398741 TNFRSF25Q93038 417 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 KIFC2Q96AC6 838 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 PYM1Q9BRP8 204 aaKnown RBP14.86□□□□□ -0.03
PRAME-201ENST00000398741 ADD3Q9UEY8 706 aaKnown RBP14.86□□□□□ -0.03
PRAME-201ENST00000398741 CTNND2Q9UQB3 1225 aa14.86□□□□□ -0.03
PRAME-201ENST00000398741 WTIPA6NIX2 430 aaPredicted RBP14.85□□□□□ -0.03
PRAME-201ENST00000398741 PPP1R3GB7ZBB8 358 aa14.85□□□□□ -0.03
PRAME-201ENST00000398741 NOM1Q5C9Z4 860 aaKnown RBP14.85□□□□□ -0.03
PRAME-201ENST00000398741 PIK3AP1Q6ZUJ8 805 aa14.85□□□□□ -0.03
PRAME-201ENST00000398741 CNGA4Q8IV77 575 aa14.85□□□□□ -0.03
PRAME-201ENST00000398741 GPR161Q8N6U8 529 aaKnown RBP14.85□□□□□ -0.03
PRAME-201ENST00000398741 CRNKL1Q9BZJ0 848 aaKnown RBP14.85□□□□□ -0.03
PRAME-201ENST00000398741 MRPL44Q9H9J2 332 aaKnown RBP14.85□□□□□ -0.03
PRAME-201ENST00000398741 ZRANB2O95218 330 aaKnown RBP eCLIP14.85□□□□□ -0.031e-10■■■□□ 15.8
PRAME-201ENST00000398741 SCG2P13521 617 aa14.85□□□□□ -0.03
PRAME-201ENST00000398741 GTF2E1P29083 439 aaPredicted RBP14.85□□□□□ -0.03
PRAME-201ENST00000398741 TRAPPC10P48553 1259 aa14.85□□□□□ -0.03
PRAME-201ENST00000398741 RRAGBQ5VZM2 374 aa14.85□□□□□ -0.03
PRAME-201ENST00000398741 SRBD1Q8N5C6 995 aaKnown RBP14.85□□□□□ -0.03
PRAME-201ENST00000398741 STAMQ92783 540 aa14.85□□□□□ -0.03
PRAME-201ENST00000398741 FAM84BQ96KN1 310 aaPredicted RBP14.85□□□□□ -0.03
PRAME-201ENST00000398741 LZTFL1Q9NQ48 299 aa14.85□□□□□ -0.03
PRAME-201ENST00000398741 ST7Q9NRC1 585 aa14.85□□□□□ -0.03
PRAME-201ENST00000398741 MINPP1Q9UNW1 487 aa14.85□□□□□ -0.03
PRAME-201ENST00000398741 ORC4O43929 436 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 KIF5CO60282 957 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 MFAP3LO75121 409 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 MCM7P33993 719 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 PBX1P40424 430 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 SF3B3Q15393 1217 aaKnown RBP14.84□□□□□ -0.03
PRAME-201ENST00000398741 NPY5RQ15761 445 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 FAM47AQ5JRC9 791 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 C3orf67Q6ZVT6 689 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 ANKRD20A12PQ8NF67 263 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 GOLGA1Q92805 767 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 GJD4Q96KN9 370 aaPredicted RBP14.84□□□□□ -0.03
PRAME-201ENST00000398741 BLZF1Q9H2G9 400 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.84□□□□□ -0.031e-7■■□□□ 11.9
PRAME-201ENST00000398741 CASP14P31944 242 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 FAM193AP78312 1265 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 CLEC4GQ6UXB4 293 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 RAD9BQ6WBX8 426 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 NSUN4Q96CB9 384 aaKnown RBP14.84□□□□□ -0.03
PRAME-201ENST00000398741 CCDC51Q96ER9 411 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 ADGRG1Q9Y653 693 aa14.84□□□□□ -0.03
PRAME-201ENST00000398741 LAMB2P55268 1798 aa14.83□□□□□ -0.03
PRAME-201ENST00000398741 XDHP47989 1333 aa14.83□□□□□ -0.03
PRAME-201ENST00000398741 ATP8B1O43520 1251 aa14.83□□□□□ -0.04
PRAME-201ENST00000398741 NMT2O60551 498 aa14.83□□□□□ -0.04
PRAME-201ENST00000398741 SEC31AO94979 1220 aaKnown RBP14.83□□□□□ -0.04
PRAME-201ENST00000398741 TXLNAP40222 546 aa14.83□□□□□ -0.04
PRAME-201ENST00000398741 CCT6AP40227 531 aaKnown RBP14.83□□□□□ -0.04
PRAME-201ENST00000398741 MECOMQ03112 1051 aa14.83□□□□□ -0.04
PRAME-201ENST00000398741 SPAG1Q07617 926 aa14.83□□□□□ -0.04
PRAME-201ENST00000398741 E2F4Q16254 413 aa14.83□□□□□ -0.04
PRAME-201ENST00000398741 ZNF384Q8TF68 577 aa14.83□□□□□ -0.04
PRAME-201ENST00000398741 EPC1Q9H2F5 836 aa14.83□□□□□ -0.04
PRAME-201ENST00000398741 DCP1AQ9NPI6 582 aaPredicted RBP14.83□□□□□ -0.04
PRAME-201ENST00000398741 ITIH6Q6UXX5 1313 aa14.83□□□□□ -0.04
PRAME-201ENST00000398741 COL4A1P02462 1669 aa14.83□□□□□ -0.04
PRAME-201ENST00000398741 TSPY2A6NKD2 308 aa14.82□□□□□ -0.04
PRAME-201ENST00000398741 N4BP3O15049 544 aa14.82□□□□□ -0.04
PRAME-201ENST00000398741 GTPBP6O43824 516 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms