RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 CCDC155Q8N6L0 562 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 CLIC6Q96NY7 704 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 SH2B2O14492 632 aaPredicted RBP15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 OPA1O60313 960 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 TRAPPC10P48553 1259 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 VAV2P52735 878 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 PAXIP1Q6ZW49 1069 aaPredicted RBP15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 KIAA0825Q8IV33 1275 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 SERPINB2P05120 415 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 OR52Z1P0C646 297 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 RHOXF2BP0C7M4 288 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 PTGDRQ13258 359 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 CPXCR1Q8N123 301 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 RHOXF2Q9BQY4 288 aa15.88■□□□□ 0.13
PCDHGA11-201ENST00000398587 CRB1P82279 1406 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 RIOK3O14730 519 aaKnown RBP15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 PRKAB2O43741 272 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 DYNLL1P63167 89 aaKnown RBP15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 TNNC1P63316 161 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 KIF23Q02241 960 aaPredicted RBP15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 PPP2R3AQ06190 1150 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 PIH1D3Q9NQM4 214 aaKnown RBP15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 AGLP35573 1532 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 KDM3AQ9Y4C1 1321 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 C2CD5Q86YS7 1000 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 CCDC17Q96LX7 622 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 FERMT1Q9BQL6 677 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 PSTPIP2Q9H939 334 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 GTPBP6O43824 516 aaPredicted RBP15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 SCNN1DP51172 638 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 DOK7Q18PE1 504 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 SLC9C1Q4G0N8 1177 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 GPKOWQ92917 476 aaPredicted RBP eCLIP15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 IQCDQ96DY2 449 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 CCDC51Q96ER9 411 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 ZBED4O75132 1171 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 GOLGA8HP0CJ92 632 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 OVOS2A0A0J9YW53 1432 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 OVOS2Q6IE36 1432 aa15.87■□□□□ 0.13
PCDHGA11-201ENST00000398587 LRRC47Q8N1G4 583 aaKnown RBP15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 MYRIPQ8NFW9 859 aa15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 QTRT2Q9H974 415 aaKnown RBP15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 BSDC1Q9NW68 430 aaPredicted RBP15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 ZSWIM5Q9P217 1185 aa15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 LONP1P36776 959 aaKnown RBP15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 BAG6P46379 1132 aa15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 CERKLQ49MI3 558 aaPredicted RBP15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 LINC00301Q8NCQ3 95 aa15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 PCDHA5Q9Y5H7 936 aa15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 CDHR2Q9BYE9 1310 aa15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 MCAMP43121 646 aa15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 NCBP1Q09161 790 aaKnown RBP15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 NSMFQ6X4W1 530 aa15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 TIGD1Q96MW7 591 aa15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 RPAP1Q9BWH6 1393 aaPredicted RBP15.86■□□□□ 0.13
PCDHGA11-201ENST00000398587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 CCDC169A6NNP5 214 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 KCNQ4P56696 695 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 RGS22Q8NE09 1264 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 TDRD7Q8NHU6 1098 aaKnown RBP15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 JAKMIP2Q96AA8 810 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 STRBPQ96SI9 672 aaKnown RBP15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 ISCA1Q9BUE6 129 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 PCDHA12Q9UN75 941 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 EXOC7Q9UPT5 735 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 RFX7Q2KHR2 1363 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 MAGEA1P43355 309 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 TRIM28Q13263 835 aaKnown RBP15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 TNFAIP1Q13829 316 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 MSL1Q68DK7 614 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 FNBP1Q96RU3 617 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 CEP83Q9Y592 693 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 ZNF500O60304 480 aaPredicted RBP15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 MYCLP12524 364 aaPredicted RBP15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 RESTQ13127 1097 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 ZNF827Q17R98 1081 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 FAM212AQ96EL1 285 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 IFT74Q96LB3 600 aa15.85■□□□□ 0.13
PCDHGA11-201ENST00000398587 FRMPD2Q68DX3 1309 aaPredicted RBP15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 KIAA1210Q9ULL0 1709 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 NT5C2P49902 561 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 ICA1Q05084 483 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 ASIC2Q16515 512 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 NELFCDQ8IXH7 590 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 CLTCQ00610 1675 aaKnown RBP15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 H7C1D1 291 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 TNFAIP3P21580 790 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 TECP42680 631 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 GPATCH4Q5T3I0 446 aaKnown RBP15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 CARD6Q9BX69 1037 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 NUCKS1Q9H1E3 243 aaKnown RBP15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 FANCLQ9NW38 375 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 KIDINS220Q9ULH0 1771 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 TMEM110-MUSTN1A8MSY1 372 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 RPS6KA4O75676 772 aa15.84■□□□□ 0.13
PCDHGA11-201ENST00000398587 EEF2P13639 858 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms