RNA–Protein interactions for RNA: ENST00000398486.2

KRT40-202, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-202ENST00000398486 CABP5Q9NP86 173 aa15.16■□□□□ 0.02
KRT40-202ENST00000398486 RTN1Q16799 776 aa15.16■□□□□ 0.02
KRT40-202ENST00000398486 MOB2Q70IA6 237 aa15.16■□□□□ 0.02
KRT40-202ENST00000398486 SCYL3Q8IZE3 742 aa15.16■□□□□ 0.02
KRT40-202ENST00000398486 FANCBQ8NB91 859 aa15.16■□□□□ 0.02
KRT40-202ENST00000398486 MKL1Q969V6 931 aa15.16■□□□□ 0.02
KRT40-202ENST00000398486 CHMP4CQ96CF2 233 aa15.16■□□□□ 0.02
KRT40-202ENST00000398486 SNHG28P0DPA3 235 aa15.15■□□□□ 0.02
KRT40-202ENST00000398486 ATP2B2Q01814 1243 aa15.15■□□□□ 0.02
KRT40-202ENST00000398486 GRM4Q14833 912 aa15.15■□□□□ 0.02
KRT40-202ENST00000398486 SLC35G1Q2M3R5 365 aa15.15■□□□□ 0.02
KRT40-202ENST00000398486 NOL9Q5SY16 702 aaKnown RBP15.15■□□□□ 0.02
KRT40-202ENST00000398486 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.15■□□□□ 0.02
KRT40-202ENST00000398486 SMARCC2Q8TAQ2 1214 aa15.15■□□□□ 0.02
KRT40-202ENST00000398486 MAD2L2Q9UI95 211 aa15.15■□□□□ 0.02
KRT40-202ENST00000398486 PARP14Q460N5 1801 aa15.15■□□□□ 0.02
KRT40-202ENST00000398486 USP17L5A8MUK1 530 aa15.14■□□□□ 0.01
KRT40-202ENST00000398486 PLEKHA8P1O95397 391 aa15.14■□□□□ 0.01
KRT40-202ENST00000398486 HSP90AA1P07900 732 aaKnown RBP15.14■□□□□ 0.01
KRT40-202ENST00000398486 PDHBP11177 359 aa15.14■□□□□ 0.01
KRT40-202ENST00000398486 FUT2Q10981 343 aa15.14■□□□□ 0.01
KRT40-202ENST00000398486 KIAA1755Q5JYT7 1200 aa15.14■□□□□ 0.01
KRT40-202ENST00000398486 CMTR1Q8N1G2 835 aaKnown RBP15.14■□□□□ 0.01
KRT40-202ENST00000398486 STAG2Q8N3U4 1231 aa15.14■□□□□ 0.01
KRT40-202ENST00000398486 MTMR7Q9Y216 660 aa15.14■□□□□ 0.01
KRT40-202ENST00000398486 SNCAIPQ9Y6H5 919 aa15.14■□□□□ 0.01
KRT40-202ENST00000398486 PTPDC1A2A3K4 754 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 UBE2Q2LH0YL09 131 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 VGLL4Q14135 290 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 SYNE3Q6ZMZ3 975 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 TMTC3Q6ZXV5 915 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 NBPF11Q86T75 865 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 MAP3K14Q99558 947 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 KIF3CO14782 793 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 CALM1P0DP23 149 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 CALM2P0DP24 149 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 CALM3P0DP25 149 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 FDPSP14324 419 aaKnown RBP15.13■□□□□ 0.01
KRT40-202ENST00000398486 PTPRAP18433 802 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 GJB2P29033 226 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 MAP3K11Q16584 847 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 PPP4R3BQ5MIZ7 849 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 USP17L2Q6R6M4 530 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 GMCL1P1Q8NEA9 526 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 PHKBQ93100 1093 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 GINM1Q9NU53 330 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 TMX2Q9Y320 296 aa15.13■□□□□ 0.01
KRT40-202ENST00000398486 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.13■□□□□ 0.01
KRT40-202ENST00000398486 CNTNAP5Q8WYK1 1306 aa15.12■□□□□ 0.01
KRT40-202ENST00000398486 LOC285556D6RIA3 1793 aa15.12■□□□□ 0.01
KRT40-202ENST00000398486 PALM3A6NDB9 673 aaPredicted RBP15.12■□□□□ 0.01
KRT40-202ENST00000398486 PPP1R12BO60237 982 aaPredicted RBP15.12■□□□□ 0.01
KRT40-202ENST00000398486 ITGBL1O95965 494 aaPredicted RBP15.12■□□□□ 0.01
KRT40-202ENST00000398486 NDUFB10O96000 172 aa15.12■□□□□ 0.01
KRT40-202ENST00000398486 GOLGA8HP0CJ92 632 aa15.12■□□□□ 0.01
KRT40-202ENST00000398486 IFNAR1P17181 557 aa15.12■□□□□ 0.01
KRT40-202ENST00000398486 PKP1Q13835 747 aa15.12■□□□□ 0.01
KRT40-202ENST00000398486 SRBD1Q8N5C6 995 aaKnown RBP15.12■□□□□ 0.01
KRT40-202ENST00000398486 CLMNQ96JQ2 1002 aa15.12■□□□□ 0.01
KRT40-202ENST00000398486 LLPHQ9BRT6 129 aaKnown RBP15.12■□□□□ 0.01
KRT40-202ENST00000398486 NF2P35240 595 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 DGKZQ13574 1117 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 CHADLQ6NUI6 762 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 CTCFLQ8NI51 663 aaPredicted RBP15.11■□□□□ 0.01
KRT40-202ENST00000398486 CNKSR2Q8WXI2 1034 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 DDX11Q96FC9 970 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 CPVLQ9H3G5 476 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 GPBP1L1Q9HC44 474 aaPredicted RBP15.11■□□□□ 0.01
KRT40-202ENST00000398486 ARHGEF10LQ9HCE6 1279 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 RBM28Q9NW13 759 aaKnown RBP15.11■□□□□ 0.01
KRT40-202ENST00000398486 SYNPO2Q9UMS6 1093 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 SMC3Q9UQE7 1217 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 RLFQ13129 1914 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 FRMPD2Q68DX3 1309 aaPredicted RBP15.11■□□□□ 0.01
KRT40-202ENST00000398486 PCNTO95613 3336 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 F5H6K3 240 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 CPLX1O14810 134 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 CYTH3O43739 400 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 MAP3K9P80192 1104 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 KLRC3Q07444 240 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 ZNF543Q08ER8 600 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 PPP2R5BQ15173 497 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 NFKBIBQ15653 356 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 NUP88Q99567 741 aaPredicted RBP15.11■□□□□ 0.01
KRT40-202ENST00000398486 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
KRT40-202ENST00000398486 DHX16O60231 1041 aaKnown RBP15.1■□□□□ 0.01
KRT40-202ENST00000398486 IREB2P48200 963 aaKnown RBP15.1■□□□□ 0.01
KRT40-202ENST00000398486 ZYXQ15942 572 aaKnown RBP15.1■□□□□ 0.01
KRT40-202ENST00000398486 SPICE1Q8N0Z3 855 aa15.1■□□□□ 0.01
KRT40-202ENST00000398486 CCDC82Q8N4S0 544 aa15.1■□□□□ 0.01
KRT40-202ENST00000398486 WDR18Q9BV38 432 aa15.1■□□□□ 0.01
KRT40-202ENST00000398486 PICK1Q9NRD5 415 aa15.1■□□□□ 0.01
KRT40-202ENST00000398486 SMCHD1A6NHR9 2005 aa15.09■□□□□ 0.01
KRT40-202ENST00000398486 CCDC196A0A1B0GTZ2 297 aa15.09■□□□□ 0.01
KRT40-202ENST00000398486 PARP1P09874 1014 aaKnown RBP15.09■□□□□ 0.01
KRT40-202ENST00000398486 KIF5BP33176 963 aa15.09■□□□□ 0.01
KRT40-202ENST00000398486 MTMR2Q13614 643 aa15.09■□□□□ 0.01
KRT40-202ENST00000398486 ASPRV1Q53RT3 343 aa15.09■□□□□ 0.01
KRT40-202ENST00000398486 LDLRAD1Q5T700 205 aa15.09■□□□□ 0.01
KRT40-202ENST00000398486 SLFN13Q68D06 897 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms