RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 PIWIL2Q8TC59 973 aaKnown RBP4.75□□□□□ -1.65
CD47-203ENST00000398258 RBCK1Q9BYM8 510 aa4.75□□□□□ -1.65
CD47-203ENST00000398258 GPR160Q9UJ42 338 aa4.75□□□□□ -1.65
CD47-203ENST00000398258 IRAK3Q9Y616 596 aa4.75□□□□□ -1.65
CD47-203ENST00000398258 FITM1A5D6W6 292 aa4.74□□□□□ -1.65
CD47-203ENST00000398258 TNFRSF1AP19438 455 aa4.74□□□□□ -1.65
CD47-203ENST00000398258 RTP5Q14D33 572 aa4.74□□□□□ -1.65
CD47-203ENST00000398258 DNAJB8Q8NHS0 232 aa4.74□□□□□ -1.65
CD47-203ENST00000398258 TMC1Q8TDI8 760 aa4.74□□□□□ -1.65
CD47-203ENST00000398258 G6PC3Q9BUM1 346 aa4.74□□□□□ -1.65
CD47-203ENST00000398258 DUSP13Q9UII6 198 aa4.74□□□□□ -1.65
CD47-203ENST00000398258 ANKRD33BA6NCL7 494 aa4.73□□□□□ -1.65
CD47-203ENST00000398258 CELA3AP09093 270 aa4.73□□□□□ -1.65
CD47-203ENST00000398258 SDHBP21912 280 aa4.73□□□□□ -1.65
CD47-203ENST00000398258 CDR1P51861 262 aa4.73□□□□□ -1.65
CD47-203ENST00000398258 SRSF3P84103 164 aaKnown RBP4.73□□□□□ -1.65
CD47-203ENST00000398258 PLP2Q04941 152 aa4.73□□□□□ -1.65
CD47-203ENST00000398258 PDE3BQ13370 1112 aa4.73□□□□□ -1.65
CD47-203ENST00000398258 TSPYL5Q86VY4 417 aaPredicted RBP4.73□□□□□ -1.65
CD47-203ENST00000398258 HID1Q8IV36 788 aa4.73□□□□□ -1.65
CD47-203ENST00000398258 OXR1Q8N573 874 aa4.73□□□□□ -1.65
CD47-203ENST00000398258 N4BP3O15049 544 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 MAPK1P28482 360 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 VIPR1P32241 457 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 GRK4P32298 578 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 ETF1P62495 437 aaKnown RBP4.72□□□□□ -1.65
CD47-203ENST00000398258 TEKQ02763 1124 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.72□□□□□ -1.65
CD47-203ENST00000398258 ADGRF1Q5T601 910 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 ZNF746Q6NUN9 644 aaPredicted RBP4.72□□□□□ -1.65
CD47-203ENST00000398258 FBXO33Q7Z6M2 555 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 NLRX1Q86UT6 975 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 FAM129CQ86XR2 697 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 ZSCAN29Q8IWY8 852 aaPredicted RBP4.72□□□□□ -1.65
CD47-203ENST00000398258 PPP1R13LQ8WUF5 828 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 LINC01599Q8WXQ3 324 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 LUC7LQ9NQ29 371 aaKnown RBP4.72□□□□□ -1.65
CD47-203ENST00000398258 TJP2Q9UDY2 1190 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 MYRFQ9Y2G1 1151 aa4.72□□□□□ -1.65
CD47-203ENST00000398258 ZC3H12DA2A288 527 aaKnown RBP4.71□□□□□ -1.66
CD47-203ENST00000398258 OR14I1A6ND48 311 aa4.71□□□□□ -1.66
CD47-203ENST00000398258 TREHO43280 583 aa4.71□□□□□ -1.66
CD47-203ENST00000398258 LRRN2O75325 713 aa4.71□□□□□ -1.66
CD47-203ENST00000398258 WIPI1Q5MNZ9 446 aaPredicted RBP4.71□□□□□ -1.66
CD47-203ENST00000398258 FRMD5Q7Z6J6 570 aa4.71□□□□□ -1.66
CD47-203ENST00000398258 DTWD2Q8NBA8 298 aa4.71□□□□□ -1.66
CD47-203ENST00000398258 ALKBH8Q96BT7 664 aaKnown RBP4.71□□□□□ -1.66
CD47-203ENST00000398258 VWCEQ96DN2 955 aa4.71□□□□□ -1.66
CD47-203ENST00000398258 GPR62Q9BZJ7 368 aa4.71□□□□□ -1.66
CD47-203ENST00000398258 ZNF281Q9Y2X9 895 aa4.71□□□□□ -1.66
CD47-203ENST00000398258 CILPO75339 1184 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 ZNF16P17020 682 aaPredicted RBP4.7□□□□□ -1.66
CD47-203ENST00000398258 ZXDAP98168 799 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 FMR1Q06787 632 aaKnown RBP eCLIP4.7□□□□□ -1.66
CD47-203ENST00000398258 DSC3Q14574 896 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 SNX17Q15036 470 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 PCNX4Q63HM2 1172 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 TMC7Q7Z402 723 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 IGDCC3Q8IVU1 814 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 SP8Q8IXZ3 490 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 ZNF428Q96B54 188 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 COX4I2Q96KJ9 171 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 NLRP2Q9NX02 1062 aa4.7□□□□□ -1.66
CD47-203ENST00000398258 SHISA3A0PJX4 238 aa4.69□□□□□ -1.66
CD47-203ENST00000398258 GFRA2O00451 464 aa4.69□□□□□ -1.66
CD47-203ENST00000398258 MATN3O15232 486 aa4.69□□□□□ -1.66
CD47-203ENST00000398258 CYP7A1P22680 504 aa4.69□□□□□ -1.66
CD47-203ENST00000398258 LTKP29376 864 aa4.69□□□□□ -1.66
CD47-203ENST00000398258 CNKSR3Q6P9H4 555 aa4.69□□□□□ -1.66
CD47-203ENST00000398258 HDXQ7Z353 690 aa4.69□□□□□ -1.66
CD47-203ENST00000398258 LINC01356Q8N9X3 169 aa4.69□□□□□ -1.66
CD47-203ENST00000398258 DMRTB1Q96MA1 342 aa4.69□□□□□ -1.66
CD47-203ENST00000398258 UNCXA6NJT0 531 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 FFAR3O14843 346 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 USP2O75604 605 aaPredicted RBP4.68□□□□□ -1.66
CD47-203ENST00000398258 VAMP1P23763 118 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 YBX1P67809 324 aaKnown RBP4.68□□□□□ -1.66
CD47-203ENST00000398258 KIR3DS1Q14943 382 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 LRRC14Q15048 493 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 SCARA3Q6AZY7 606 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 SLC16A11Q8NCK7 471 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 BCL2L13Q9BXK5 485 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 OSBPL7Q9BZF2 842 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 GPATCH2Q9NW75 528 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 PPP4R2Q9NY27 417 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 CYP8B1Q9UNU6 501 aa4.68□□□□□ -1.66
CD47-203ENST00000398258 HRKO00198 91 aa4.67□□□□□ -1.66
CD47-203ENST00000398258 RANGAP1P46060 587 aaPredicted RBP4.67□□□□□ -1.66
CD47-203ENST00000398258 RBM25P49756 843 aaKnown RBP4.67□□□□□ -1.66
CD47-203ENST00000398258 ERICH6BQ5W0A0 696 aa4.67□□□□□ -1.66
CD47-203ENST00000398258 MRPL41Q8IXM3 137 aaKnown RBP4.67□□□□□ -1.66
CD47-203ENST00000398258 ANKS4BQ8N8V4 417 aa4.67□□□□□ -1.66
CD47-203ENST00000398258 MZB1Q8WU39 189 aa4.67□□□□□ -1.66
CD47-203ENST00000398258 SETDB2Q96T68 719 aa4.67□□□□□ -1.66
CD47-203ENST00000398258 GPR20Q99678 358 aa4.67□□□□□ -1.66
CD47-203ENST00000398258 MENTQ9BUN1 341 aa4.67□□□□□ -1.66
CD47-203ENST00000398258 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
CD47-203ENST00000398258 SCAND2PQ9GZW5 306 aaPredicted RBP4.67□□□□□ -1.66
CD47-203ENST00000398258 TRIT1Q9H3H1 467 aaKnown RBP4.67□□□□□ -1.66
CD47-203ENST00000398258 IGSF5Q9NSI5 407 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms