RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 PDE4DQ08499 809 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 TTC19Q6DKK2 380 aaPredicted RBP12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 SECISBP2LQ93073 1101 aaKnown RBP12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 HAUS4Q9H6D7 363 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 HPS5Q9UPZ3 1129 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 UBN2Q6ZU65 1347 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PALLDQ8WX93 1383 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 UBE2Q2LH0YL09 131 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 FGFR1OPO95684 399 aaKnown RBP12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CALML3P27482 149 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 GUCY1A2P33402 732 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 LIG3P49916 1009 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PPARAQ07869 468 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CCDC152Q4G0S7 254 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 MICALCLQ6ZW33 695 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 SEC63Q9UGP8 760 aaKnown RBP12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 NEDD4P46934 1319 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PDE8BO95263 885 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CFAP58Q5T655 872 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 GIMAP7Q8NHV1 300 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ADAMTS13Q76LX8 1427 aa12.47□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PDE8AO60658 829 aa12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PCCAP05165 728 aaPredicted RBP12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CCT5P48643 541 aa12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 GRIN1Q05586 938 aa12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 TAX1BP1Q86VP1 789 aa12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 ZBTB38Q8NAP3 1195 aaPredicted RBP12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 BCAS4Q8TDM0 211 aa12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 SEPT11Q9NVA2 429 aaKnown RBP12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CTSWP56202 376 aa12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 VSNL1P62760 191 aa12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 PAGE5Q96GU1 130 aa12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 CRNKL1Q9BZJ0 848 aaKnown RBP12.46□□□□□ -0.41
CSGALNACT1-202ENST00000397998 BCAMP50895 628 aa12.46□□□□□ -0.42
CSGALNACT1-202ENST00000397998 KRT31Q15323 416 aa12.46□□□□□ -0.42
CSGALNACT1-202ENST00000397998 C8orf74Q6P047 294 aa12.46□□□□□ -0.42
CSGALNACT1-202ENST00000397998 TRIM65Q6PJ69 517 aa12.46□□□□□ -0.42
CSGALNACT1-202ENST00000397998 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.42
CSGALNACT1-202ENST00000397998 RAD9BQ6WBX8 426 aa12.46□□□□□ -0.42
CSGALNACT1-202ENST00000397998 ANKRD18AQ8IVF6 992 aa12.46□□□□□ -0.42
CSGALNACT1-202ENST00000397998 CRACR2BQ8N4Y2 399 aaPredicted RBP12.46□□□□□ -0.42
CSGALNACT1-202ENST00000397998 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.42
CSGALNACT1-202ENST00000397998 TSPOAP1O95153 1857 aa12.46□□□□□ -0.42
CSGALNACT1-202ENST00000397998 GOLGA6L7A0A1B0GV03 622 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 NBPF26B4DH59 902 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 G3V3G9 751 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 SRGAP2O75044 1071 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 ERLIN2O94905 339 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 LIFRP42702 1097 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 MRPS25P82663 173 aaKnown RBP12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 IFFO1Q0D2I5 559 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 FAM47AQ5JRC9 791 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 NBPF14Q5TI25 921 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 TYW1BQ6NUM6 668 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 NBPF10Q6P3W6 841 aaKnown RBP12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 FAM207AQ9NSI2 230 aaPredicted RBP12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 BICDL2A1A5D9 508 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 INPP5BP32019 993 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 LETM2Q2VYF4 491 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 ANKRD13CQ8N6S4 541 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 ATG3Q9NT62 314 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 ANKRD26Q9UPS8 1709 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 GNGT1P63211 74 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 STRBPQ96SI9 672 aaKnown RBP12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 LY9Q9HBG7 655 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 TECPR2O15040 1411 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 NDUFA10O95299 355 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 HPDP32754 393 aaPredicted RBP12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 UBA5Q9GZZ9 404 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 MCM9Q9NXL9 1143 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 FEZ2Q9UHY8 353 aaPredicted RBP12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
CSGALNACT1-202ENST00000397998 NCAPD2Q15021 1401 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 ZPR1O75312 459 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 RPN1P04843 607 aaKnown RBP12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 MAGEA1P43355 309 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 ATP1A2P50993 1020 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 NAPAP54920 295 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 CYP27A1Q02318 531 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 TMEM266Q2M3C6 531 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 FUT8Q9BYC5 575 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 GOPCQ9HD26 462 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 NIP7Q9Y221 180 aaKnown RBP eCLIP12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 GTPBP6O43824 516 aaPredicted RBP12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 N4BP1O75113 896 aaKnown RBP12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 PARP1P09874 1014 aaKnown RBP12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 PRPF4BQ13523 1007 aaKnown RBP12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 TCERG1LQ5VWI1 586 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 LCORLQ8N3X6 602 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 IFIH1Q9BYX4 1025 aaKnown RBP12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 HDAC6Q9UBN7 1215 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 DLG5Q8TDM6 1919 aa12.44□□□□□ -0.42
CSGALNACT1-202ENST00000397998 COL15A1P39059 1388 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms