RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 CD248Q9HCU0 757 aa8.05□□□□□ -1.12
SMCO1-201ENST00000397537 SUCOQ9UBS9 1254 aaKnown RBP8.05□□□□□ -1.12
SMCO1-201ENST00000397537 PNMA8BQ9ULN7 279 aaPredicted RBP8.05□□□□□ -1.12
SMCO1-201ENST00000397537 BCS1LQ9Y276 419 aa8.05□□□□□ -1.12
SMCO1-201ENST00000397537 UHRF1BP1Q6BDS2 1440 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 FER1L4A9Z1Z3 1794 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 ARHGEF40Q8TER5 1519 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 POTEB3A0JP26 581 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 ERVH48-1M5A8F1 160 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 ZPR1O75312 459 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 ASGR2P07307 311 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 GLULP15104 373 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 MAPK9P45984 424 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 ID4P47928 161 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 AK2P54819 239 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 CLCQ05315 142 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 DUSP27Q5VZP5 1158 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 POTEBQ6S5H4 581 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 GK5Q6ZS86 529 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 BPHLQ86WA6 291 aaPredicted RBP8.04□□□□□ -1.12
SMCO1-201ENST00000397537 ZDHHC1Q8WTX9 485 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 AGBL1Q96MI9 1066 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 SMYD2Q9NRG4 433 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 SAP30BPQ9UHR5 308 aaKnown RBP8.04□□□□□ -1.12
SMCO1-201ENST00000397537 PPM1HQ9ULR3 514 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 ROBO2Q9HCK4 1378 aa8.04□□□□□ -1.12
SMCO1-201ENST00000397537 ERC2O15083 957 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 DNAJC8O75937 253 aaPredicted RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 CAPN3P20807 821 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 OAS2P29728 719 aaKnown RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 STT3AP46977 705 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 CEBPAP49715 358 aaPredicted RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 ZNF165P49910 485 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 FCGRTP55899 365 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 PIP4K2BP78356 416 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 APBA1Q02410 837 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 AGERQ15109 404 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 SLC10A6Q3KNW5 377 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 FAM209AQ5JX71 171 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 VARS2Q5ST30 1063 aaKnown RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 RC3H1Q5TC82 1133 aaKnown RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 HEATR6Q6AI08 1181 aaKnown RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 NLRP8Q86W28 1048 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 MARVELD3Q96A59 401 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 LRGUKQ96M69 825 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 MYD88Q99836 296 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 ALG13Q9NP73 1137 aaKnown RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 TSR3Q9UJK0 312 aaKnown RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 ANKRD6Q9Y2G4 727 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 FANCAO15360 1455 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 SRCAPQ6ZRS2 3230 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 SERTM1A2A2V5 107 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 K7ENM7 598 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 NEMP1O14524 444 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 LMNB1P20700 586 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 HOXC13P31276 330 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 MMP16P51512 607 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 NBPF8Q3BBV2 869 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 LMBRD2Q68DH5 695 aaPredicted RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 AGMOQ6ZNB7 445 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 LRRC47Q8N1G4 583 aaKnown RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 CPA6Q8N4T0 437 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 ATRIPQ8WXE1 791 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 ZBED2Q9BTP6 218 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 C1QTNF2Q9BXJ5 285 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 MTFR1LQ9H019 292 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 PRDM9Q9NQV7 894 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 AAASQ9NRG9 546 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 RASSF1Q9NS23 344 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 GPR52Q9Y2T5 361 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 ERBB4Q15303 1308 aa8.03□□□□□ -1.12
SMCO1-201ENST00000397537 ZNF335Q9H4Z2 1342 aaPredicted RBP8.03□□□□□ -1.12
SMCO1-201ENST00000397537 hCG_1642624A0A1W2PR95 340 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 PSEN2P49810 448 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 USP14P54578 494 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 EMP3P54852 163 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 GTF2H3Q13889 308 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 FAM98CQ17RN3 349 aaKnown RBP8.02□□□□□ -1.13
SMCO1-201ENST00000397537 ZNF438Q7Z4V0 828 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 TTC6Q86TZ1 520 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 SNX32Q86XE0 403 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 SLC41A1Q8IVJ1 513 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 FAM160A2Q8N612 972 aaPredicted RBP8.02□□□□□ -1.13
SMCO1-201ENST00000397537 C19orf47Q8N9M1 422 aaKnown RBP8.02□□□□□ -1.13
SMCO1-201ENST00000397537 NAXEQ8NCW5 288 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 ZNF496Q96IT1 587 aaPredicted RBP8.02□□□□□ -1.13
SMCO1-201ENST00000397537 PPM1MQ96MI6 270 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 CHRDQ9H2X0 955 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 KIAA1586Q9HCI6 787 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 BRMS1Q9HCU9 246 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 BLOC1S4Q9NUP1 217 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 TMEM63CQ9P1W3 806 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 FBXO10Q9UK96 956 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 TMX2Q9Y320 296 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 SIGLEC1Q9BZZ2 1709 aa8.02□□□□□ -1.13
SMCO1-201ENST00000397537 A0A1B0GVC2 190 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 PHF20L1A8MW92 1017 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 EREGO14944 169 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 APBA3O96018 575 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 POU3F2P20265 443 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms