RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 APOA5Q6Q788 366 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 TMTC2Q8N394 836 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 ZNF296Q8WUU4 475 aaPredicted RBP19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 ANKS1AQ92625 1134 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 CFHR5Q9BXR6 569 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 ELP3Q9H9T3 547 aa19.85■□□□□ 0.77
TSPAN4-205ENST00000397406 PFKFB2O60825 505 aa19.84■□□□□ 0.77
TSPAN4-205ENST00000397406 ZBTB48P10074 688 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-205ENST00000397406 RRP1BQ14684 758 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-205ENST00000397406 DGKHQ86XP1 1220 aa19.84■□□□□ 0.77
TSPAN4-205ENST00000397406 IFNL1Q8IU54 200 aa19.84■□□□□ 0.77
TSPAN4-205ENST00000397406 ANKRD13AQ8IZ07 590 aa19.84■□□□□ 0.77
TSPAN4-205ENST00000397406 NECAB1Q8N987 351 aa19.84■□□□□ 0.77
TSPAN4-205ENST00000397406 MS4A4AQ96JQ5 239 aa19.84■□□□□ 0.77
TSPAN4-205ENST00000397406 HPS5Q9UPZ3 1129 aa19.84■□□□□ 0.77
TSPAN4-205ENST00000397406 CCDC69A6NI79 296 aa19.83■□□□□ 0.76
TSPAN4-205ENST00000397406 STK3Q13188 491 aa19.83■□□□□ 0.76
TSPAN4-205ENST00000397406 VGLL4Q14135 290 aa19.83■□□□□ 0.76
TSPAN4-205ENST00000397406 IFIT1BQ5T764 474 aaKnown RBP19.83■□□□□ 0.76
TSPAN4-205ENST00000397406 NFXL1Q6ZNB6 911 aa19.83■□□□□ 0.76
TSPAN4-205ENST00000397406 MIGA2Q7L4E1 593 aa19.83■□□□□ 0.76
TSPAN4-205ENST00000397406 GTF3C6Q969F1 213 aa19.83■□□□□ 0.76
TSPAN4-205ENST00000397406 CEP95Q96GE4 821 aa19.83■□□□□ 0.76
TSPAN4-205ENST00000397406 DOCK1Q14185 1865 aa19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 NID2Q14112 1375 aa19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 GOLGA8BA8MQT2 603 aa19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 GPR25O00155 361 aa19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 SCRN1Q12765 414 aa19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 SREBF2Q12772 1141 aa19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 SHROOM1Q2M3G4 852 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 CCDC83Q8IWF9 413 aa19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 SPRYD3Q8NCJ5 442 aa19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 OPTNQ96CV9 577 aa19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 INTS4Q96HW7 963 aaKnown RBP19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 SLKQ9H2G2 1235 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 MTMR4Q9NYA4 1195 aa19.82■□□□□ 0.76
TSPAN4-205ENST00000397406 TESPA1A2RU30 521 aaPredicted RBP19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 MANSC4A6NHS7 340 aaPredicted RBP19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 CCDC85CA6NKD9 419 aa19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 PHF20L1A8MW92 1017 aa19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 GDF11O95390 407 aa19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 JAG1P78504 1218 aa19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 MAP3K9P80192 1104 aa19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 ABCB5Q2M3G0 1257 aa19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 ZNF654Q8IZM8 581 aa19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 NAP1L2Q9ULW6 460 aaPredicted RBP19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 SLC12A7Q9Y666 1083 aa19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 SNCAIPQ9Y6H5 919 aa19.81■□□□□ 0.76
TSPAN4-205ENST00000397406 MPHOSPH10O00566 681 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-205ENST00000397406 ZBTB43O43298 467 aa19.8■□□□□ 0.76
TSPAN4-205ENST00000397406 GUCY1A2P33402 732 aa19.8■□□□□ 0.76
TSPAN4-205ENST00000397406 RCAN1P53805 252 aa19.8■□□□□ 0.76
TSPAN4-205ENST00000397406 CAP1Q01518 475 aa19.8■□□□□ 0.76
TSPAN4-205ENST00000397406 NOM1Q5C9Z4 860 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-205ENST00000397406 TMEM179Q6ZVK1 233 aa19.8■□□□□ 0.76
TSPAN4-205ENST00000397406 HOOK2Q96ED9 719 aa19.8■□□□□ 0.76
TSPAN4-205ENST00000397406 MYL10Q9BUA6 226 aa19.8■□□□□ 0.76
TSPAN4-205ENST00000397406 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
TSPAN4-205ENST00000397406 HSP90AA1P07900 732 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-205ENST00000397406 CCT2P78371 535 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-205ENST00000397406 CTU1Q7Z7A3 348 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-205ENST00000397406 RAB11FIP4Q86YS3 637 aa19.79■□□□□ 0.76
TSPAN4-205ENST00000397406 CLEC10AQ8IUN9 316 aa19.79■□□□□ 0.76
TSPAN4-205ENST00000397406 ZKSCAN4Q969J2 545 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-205ENST00000397406 TMEM47Q9BQJ4 181 aa19.79■□□□□ 0.76
TSPAN4-205ENST00000397406 STX8Q9UNK0 236 aa19.79■□□□□ 0.76
TSPAN4-205ENST00000397406 GH2P01242 217 aa19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 RXRAP19793 462 aa19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 METAP2P50579 478 aaKnown RBP eCLIP19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 TROAPQ12815 778 aa19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 SEPT2Q15019 361 aa19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 DCAF15Q66K64 600 aa19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 SYNE3Q6ZMZ3 975 aa19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 CATIPQ7Z7H3 387 aa19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 MICU3Q86XE3 530 aa19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 BRI3BPQ8WY22 251 aa19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 KAT14Q9H8E8 782 aa19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 NCOA5Q9HCD5 579 aaKnown RBP19.78■□□□□ 0.76
TSPAN4-205ENST00000397406 DDAH1O94760 285 aa19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 TTLL1O95922 423 aa19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 TOP1P11387 765 aaKnown RBP19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 INPP5BP32019 993 aa19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 CAP2P40123 477 aa19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 INHBEP58166 350 aa19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 PNMA1Q8ND90 353 aa19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 ZNF341Q9BYN7 854 aa19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 CABP5Q9NP86 173 aa19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 FAM217BQ9NTX9 383 aaPredicted RBP19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 ZNF112Q9UJU3 913 aa19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 ZBTB21Q9ULJ3 1066 aa19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.77■□□□□ 0.76
TSPAN4-205ENST00000397406 PHIPQ8WWQ0 1821 aa19.77■□□□□ 0.75
TSPAN4-205ENST00000397406 GOLGA8AA7E2F4 631 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 CALM1P0DP23 149 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 CALM2P0DP24 149 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 CALM3P0DP25 149 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 DDIT3P35638 169 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 PPP4R3BQ5MIZ7 849 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 WRNIP1Q96S55 665 aa19.76■□□□□ 0.75
TSPAN4-205ENST00000397406 KANSL2Q9H9L4 492 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms