RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 MAP3K13O43283 966 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 GAS2O43903 313 aaKnown RBP2.8□□□□□ -1.96
NEB-203ENST00000397345 SCG2P13521 617 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 MTHFSP49914 203 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CAV1Q03135 178 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 TRPC3Q13507 836 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 C11orf91Q3C1V1 193 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 TTC25Q96NG3 672 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 TSPAN18Q96SJ8 248 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 APAF1O14727 1248 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 THEMIS2Q5TEJ8 643 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 GMNNO75496 209 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 IFIT5Q13325 482 aaKnown RBP2.8□□□□□ -1.96
NEB-203ENST00000397345 KRT28Q7Z3Y7 464 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 USHBP1Q8N6Y0 703 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CEP295NLQ96MC4 621 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 MOSPD1Q9UJG1 213 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 SNAPC4Q5SXM2 1469 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 HSPA2P54652 639 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CCDC152Q4G0S7 254 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 MYSM1Q5VVJ2 828 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 LRSAM1Q6UWE0 723 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CCDC25Q86WR0 208 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 JDP2Q8WYK2 163 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 ABCB11O95342 1321 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 IFT140Q96RY7 1462 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 SRRM3A6NNA2 597 aaPredicted RBP2.8□□□□□ -1.96
NEB-203ENST00000397345 OPHN1O60890 802 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 C4BPBP20851 252 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 SERPINB4P48594 390 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 Q4G0T1 1027 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 OGFOD1Q8N543 542 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 RNPEPQ9H4A4 650 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 BATF3Q9NR55 127 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 UNCXA6NJT0 531 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 PSMA3P25788 255 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 ARL6IP4Q66PJ3 421 aaKnown RBP2.8□□□□□ -1.96
NEB-203ENST00000397345 FAM210AQ96ND0 272 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 C19orf44Q9H6X5 657 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 KANSL1LA0AUZ9 987 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 A6NJR5 290 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 SPDYE16A6NNV3 312 aaPredicted RBP2.8□□□□□ -1.96
NEB-203ENST00000397345 SESN3P58005 492 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 PRPF40BQ6NWY9 871 aaKnown RBP2.8□□□□□ -1.96
NEB-203ENST00000397345 KRT26Q7Z3Y9 468 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 PARP9Q8IXQ6 854 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 IKBKGQ9Y6K9 419 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 SCAF11Q99590 1463 aaKnown RBP2.8□□□□□ -1.96
NEB-203ENST00000397345 CETN3O15182 167 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CREB3O43889 395 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 C8orf34Q49A92 452 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CACTIN-AS1Q8N1I8 211 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 OSCP1Q8WVF1 389 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 ERLEC1Q96DZ1 483 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 RMDN2Q96LZ7 410 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 EYA3Q99504 573 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 COQ7Q99807 217 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 TANGO6Q9C0B7 1094 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 NBPF3Q9H094 633 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 SLC12A7Q9Y666 1083 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 H3BQF6 201 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 WHAMMP3Q1A5X7 153 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CCDC144BQ3MJ40 725 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CPLX4Q7Z7G2 160 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 IFNL2Q8IZJ0 200 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 TCP11L2Q8N4U5 519 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 EFCAB8A8MWE9 144 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CHMP2AO43633 222 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CDC25BP30305 580 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 MSL1Q68DK7 614 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 DAAM2Q86T65 1068 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 CCDC63Q8NA47 563 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 TNMDQ9H2S6 317 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 NLRP2Q9NX02 1062 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 SH3BP5O60239 455 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 ELMSAN1Q6PJG2 1045 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 ALKBH8Q96BT7 664 aaKnown RBP2.8□□□□□ -1.96
NEB-203ENST00000397345 PYCARDQ9ULZ3 195 aa2.8□□□□□ -1.96
NEB-203ENST00000397345 STXBP3O00186 592 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 AKR1B10O60218 316 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 HIP1RO75146 1068 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 POU5F1Q01860 360 aaKnown RBP2.79□□□□□ -1.96
NEB-203ENST00000397345 PRR23CQ6ZRP0 262 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 EFCAB13Q8IY85 973 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 KRT39Q6A163 491 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 UTS2BQ765I0 119 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 UBE2Q1Q7Z7E8 422 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 PRUNE1Q86TP1 453 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 PACS2Q86VP3 889 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 TBATAQ96M53 351 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 MCCC1Q96RQ3 725 aaPredicted RBP2.79□□□□□ -1.96
NEB-203ENST00000397345 IMPG2Q9BZV3 1241 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 MAD1L1Q9Y6D9 718 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 MFAP3LO75121 409 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 MYCLP1P12525 358 aaPredicted RBP2.79□□□□□ -1.96
NEB-203ENST00000397345 ATP1A2P50993 1020 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 RALGDSQ12967 914 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.79□□□□□ -1.96
NEB-203ENST00000397345 PIGBOS1A0A0B4J2F0 54 aa2.79□□□□□ -1.96
NEB-203ENST00000397345 PRC1O43663 620 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms