RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 INPP5BP32019 993 aa17.27■□□□□ 0.36
TM9SF1-202ENST00000396854 ICA1Q05084 483 aa17.27■□□□□ 0.36
TM9SF1-202ENST00000396854 MAP3K11Q16584 847 aa17.27■□□□□ 0.36
TM9SF1-202ENST00000396854 NOL9Q5SY16 702 aaKnown RBP17.27■□□□□ 0.36
TM9SF1-202ENST00000396854 CHADLQ6NUI6 762 aa17.27■□□□□ 0.36
TM9SF1-202ENST00000396854 CLEC10AQ8IUN9 316 aa17.27■□□□□ 0.36
TM9SF1-202ENST00000396854 ZNF654Q8IZM8 581 aa17.27■□□□□ 0.36
TM9SF1-202ENST00000396854 TMEM47Q9BQJ4 181 aa17.27■□□□□ 0.36
TM9SF1-202ENST00000396854 SLC12A7Q9Y666 1083 aa17.27■□□□□ 0.36
TM9SF1-202ENST00000396854 PFKFB2O60825 505 aa17.27■□□□□ 0.35
TM9SF1-202ENST00000396854 MKL1Q969V6 931 aa17.27■□□□□ 0.35
TM9SF1-202ENST00000396854 KAT14Q9H8E8 782 aa17.27■□□□□ 0.35
TM9SF1-202ENST00000396854 FZD1Q9UP38 647 aa17.27■□□□□ 0.35
TM9SF1-202ENST00000396854 GOLGA8BA8MQT2 603 aa17.26■□□□□ 0.35
TM9SF1-202ENST00000396854 KIF3CO14782 793 aa17.26■□□□□ 0.35
TM9SF1-202ENST00000396854 DDAH1O94760 285 aa17.26■□□□□ 0.35
TM9SF1-202ENST00000396854 SCYL3Q8IZE3 742 aa17.26■□□□□ 0.35
TM9SF1-202ENST00000396854 SYNPO2Q9UMS6 1093 aa17.26■□□□□ 0.35
TM9SF1-202ENST00000396854 HPS5Q9UPZ3 1129 aa17.26■□□□□ 0.35
TM9SF1-202ENST00000396854 TRAF5O00463 557 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 ZBTB43O43298 467 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 EEF2P13639 858 aaKnown RBP17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 TROAPQ12815 778 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 SYNE3Q6ZMZ3 975 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 CATIPQ7Z7H3 387 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 SIAH1Q8IUQ4 282 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 PNMA1Q8ND90 353 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 GTF3C6Q969F1 213 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 RBSNQ9H1K0 784 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 TMEM63CQ9P1W3 806 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 RBM27Q9P2N5 1060 aaKnown RBP17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 IREB2P48200 963 aaKnown RBP17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 ST3GAL1Q11201 340 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 LRSAM1Q6UWE0 723 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 CLIP2Q9UDT6 1046 aa17.25■□□□□ 0.35
TM9SF1-202ENST00000396854 ITGBL1O95965 494 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 CALM1P0DP23 149 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 CALM2P0DP24 149 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 CALM3P0DP25 149 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 MAP3K9P80192 1104 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 SCRN1Q12765 414 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 PRKG1Q13976 671 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 MICU3Q86XE3 530 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 CHAMP1Q96JM3 812 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 MAP3K14Q99558 947 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 NAP1L2Q9ULW6 460 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 PTPRFP10586 1907 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 METAP2P50579 478 aaKnown RBP eCLIP17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 STK3Q13188 491 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 HS1BP3Q53T59 392 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 PDLIM2Q96JY6 352 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 MYL10Q9BUA6 226 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 ARHGEF10LQ9HCE6 1279 aa17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-202ENST00000396854 WDR33Q9C0J8 1336 aaKnown RBP17.23■□□□□ 0.35
TM9SF1-202ENST00000396854 PPP2R5BQ15173 497 aa17.23■□□□□ 0.35
TM9SF1-202ENST00000396854 FOXD4L5Q5VV16 416 aaPredicted RBP17.23■□□□□ 0.35
TM9SF1-202ENST00000396854 ARMC9Q7Z3E5 817 aa17.23■□□□□ 0.35
TM9SF1-202ENST00000396854 ZSCAN30Q86W11 494 aa17.23■□□□□ 0.35
TM9SF1-202ENST00000396854 LRRC47Q8N1G4 583 aaKnown RBP17.23■□□□□ 0.35
TM9SF1-202ENST00000396854 NECAB1Q8N987 351 aa17.23■□□□□ 0.35
TM9SF1-202ENST00000396854 FOXD4L4Q8WXT5 416 aaPredicted RBP17.23■□□□□ 0.35
TM9SF1-202ENST00000396854 GOLGA8AA7E2F4 631 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 USP17L5A8MUK1 530 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 RXRAP19793 462 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 FKBP1BP68106 108 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 FMR1Q06787 632 aaKnown RBP eCLIP17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 RAB11FIP4Q86YS3 637 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 CCDC83Q8IWF9 413 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 CHMP4CQ96CF2 233 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 NAP1L5Q96NT1 182 aaPredicted RBP17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 TMX2Q9Y320 296 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 SNCAIPQ9Y6H5 919 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 MYH6P13533 1939 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 A0A1W2PRG0 241 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 UNCXA6NJT0 531 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 PTPRAP18433 802 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 CCT2P78371 535 aaKnown RBP17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 VGLL4Q14135 290 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 GMCL1P1Q8NEA9 526 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
TM9SF1-202ENST00000396854 SNHG28P0DPA3 235 aa17.21■□□□□ 0.35
TM9SF1-202ENST00000396854 TTLL12Q14166 644 aaPredicted RBP17.21■□□□□ 0.35
TM9SF1-202ENST00000396854 GRM4Q14833 912 aa17.21■□□□□ 0.35
TM9SF1-202ENST00000396854 RTN1Q16799 776 aa17.21■□□□□ 0.35
TM9SF1-202ENST00000396854 WDR18Q9BV38 432 aa17.21■□□□□ 0.35
TM9SF1-202ENST00000396854 SH2D4AQ9H788 454 aa17.21■□□□□ 0.35
TM9SF1-202ENST00000396854 FAM217BQ9NTX9 383 aaPredicted RBP17.21■□□□□ 0.35
TM9SF1-202ENST00000396854 CSADQ9Y600 493 aa17.21■□□□□ 0.35
TM9SF1-202ENST00000396854 YY1P25490 414 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 CDC27P30260 824 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 LDLRAD1Q5T700 205 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 ACER1Q8TDN7 264 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms