RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ASPHQ12797 758 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 TSTA3Q13630 321 aaPredicted RBP11.33□□□□□ -0.6
COL4A4-201ENST00000396625 EFCAB13Q8IY85 973 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 TEKT1Q969V4 418 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 ANGPTL2Q9UKU9 493 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 MAP3K1Q13233 1512 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 H3BRJ5 948 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 NVLO15381 856 aaKnown RBP11.33□□□□□ -0.6
COL4A4-201ENST00000396625 RXRAP19793 462 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 TRIM59Q8IWR1 403 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 BCAS4Q8TDM0 211 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 SATB2Q9UPW6 733 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 PDE1AP54750 535 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 C4orf50Q6ZRC1 276 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 FAM186BQ8IYM0 893 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
COL4A4-201ENST00000396625 FGD4Q96M96 766 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 IQSEC3Q9UPP2 1182 aaPredicted RBP11.33□□□□□ -0.6
COL4A4-201ENST00000396625 CREB3O43889 395 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 CCT5P48643 541 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 CREB3L3Q68CJ9 461 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 CYB5RLQ6IPT4 315 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 MCM9Q9NXL9 1143 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 BZW2Q9Y6E2 419 aaKnown RBP11.33□□□□□ -0.6
COL4A4-201ENST00000396625 INTS4Q96HW7 963 aaKnown RBP11.33□□□□□ -0.6
COL4A4-201ENST00000396625 TSC22D3Q99576 134 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 RRP15Q9Y3B9 282 aaKnown RBP11.33□□□□□ -0.6
COL4A4-201ENST00000396625 GTPBP10A4D1E9 387 aaKnown RBP11.33□□□□□ -0.6
COL4A4-201ENST00000396625 OATP04181 439 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 LMNB1P20700 586 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 IL9RQ01113 521 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 SNX1Q13596 522 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 ST13P4Q8IZP2 240 aaPredicted RBP11.33□□□□□ -0.6
COL4A4-201ENST00000396625 PDE11AQ9HCR9 933 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 RAB20Q9NX57 234 aa11.33□□□□□ -0.6
COL4A4-201ENST00000396625 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL4A4-201ENST00000396625 KDM5AP29375 1690 aaKnown RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 ASXL1Q8IXJ9 1541 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 PI4KAP2A4QPH2 592 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 NOP56O00567 594 aaKnown RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 GARSP41250 739 aaKnown RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 NEK2P51955 445 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 ITKQ08881 620 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 NOP9Q86U38 636 aaKnown RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 PI4KAP1Q8N8J0 262 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 TRIM55Q9BYV6 548 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 ARHGEF35A5YM69 484 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 KRT19P08727 400 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 HSPA8P11142 646 aaKnown RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 ATF2P15336 505 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 CAPN12Q6ZSI9 719 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 RHPN1Q8TCX5 695 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 MCF2P10911 925 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 YWHAEP62258 255 aaKnown RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 CTTNBP2Q8WZ74 1663 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 NONOQ15233 471 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 FAM133BQ5BKY9 247 aaKnown RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 RAB44Q7Z6P3 723 aaPredicted RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 IQCDQ96DY2 449 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 KCNK3O14649 394 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 RFC4P35249 363 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 POSTNQ15063 836 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 SKIP12755 728 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 ARMC9Q7Z3E5 817 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 TCP11Q8WWU5 503 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 POLD1P28340 1107 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 RNASELQ05823 741 aaKnown RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 ZC3H18Q86VM9 953 aaKnown RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 GPIHBP1Q8IV16 184 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 FAM8A1Q9UBU6 413 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 TTC41PQ6P2S7 1318 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 PDE6AP16499 860 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 EEF1GP26641 437 aaKnown RBP11.32□□□□□ -0.6
COL4A4-201ENST00000396625 KIFC3Q9BVG8 833 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 TMOD4Q9NZQ9 345 aa11.32□□□□□ -0.6
COL4A4-201ENST00000396625 PASKQ96RG2 1323 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 MYH6P13533 1939 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 E2F5Q15329 346 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 RRAGAQ7L523 313 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 MAP7D3Q8IWC1 876 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 TEX11Q8IYF3 940 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 SPDYE2BA6NHP3 402 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 SPDYE6P0CI01 402 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 SLC12A1Q13621 1099 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 SFMBT1Q9UHJ3 866 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 FAM170AA1A519 330 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 PRPF6O94906 941 aaKnown RBP11.31□□□□□ -0.6
COL4A4-201ENST00000396625 TAF11Q15544 211 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 ARHGAP44Q17R89 818 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 SMC5Q8IY18 1101 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 OLA1Q9NTK5 396 aaKnown RBP11.31□□□□□ -0.6
COL4A4-201ENST00000396625 WWC3Q9ULE0 1092 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 ZBTB24O43167 697 aaPredicted RBP11.31□□□□□ -0.6
COL4A4-201ENST00000396625 IGHDP01880 384 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 DAB2P98082 770 aa11.31□□□□□ -0.6
COL4A4-201ENST00000396625 NUDT16Q96DE0 195 aaKnown RBP11.31□□□□□ -0.6
COL4A4-201ENST00000396625 TEX13AQ9BXU3 409 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms