RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 HIP1O00291 1037 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 PTPN21Q16825 1174 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 INF2Q27J81 1249 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 CCDC24Q8N4L8 307 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 CNTNAP4Q9C0A0 1308 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 LMO7Q8WWI1 1683 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 IRAK1P51617 712 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 MTX1Q13505 466 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 CFAP58Q5T655 872 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 CEP128Q6ZU80 1094 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 KIAA0825Q8IV33 1275 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 ECHDC1Q9NTX5 307 aa12.69□□□□□ -0.38
RAPGEF3-202ENST00000395358 ADCY9O60503 1353 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 PECAM1P16284 738 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 CTSWP56202 376 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 CCT2P78371 535 aaKnown RBP12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 EHBP1Q8NDI1 1231 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 MCM8Q9UJA3 840 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 EYA2O00167 538 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 CHMLP26374 656 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 RPS6KA3P51812 740 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 CKAP4Q07065 602 aaKnown RBP12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 THEMIS2Q5TEJ8 643 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 CCDC170Q8IYT3 715 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 DISP2A7MBM2 1401 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 PPFIA3O75145 1194 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 LUC7L3O95232 432 aaKnown RBP12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 TUBB2AQ13885 445 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 DZIP1Q86YF9 867 aaKnown RBP12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 ARFGAP2Q8N6H7 521 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 SSH3Q8TE77 659 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 LMBR1Q8WVP7 490 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 WDR24Q96S15 920 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 TUBB2BQ9BVA1 445 aa12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 PARP4Q9UKK3 1724 aaKnown RBP12.68□□□□□ -0.38
RAPGEF3-202ENST00000395358 C6orf229H3BNL8 230 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 ADKP55263 362 aaKnown RBP12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 VSNL1P62760 191 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 TRIM28Q13263 835 aaKnown RBP12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 RBM17Q96I25 401 aaKnown RBP12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 GUCA1BQ9UMX6 200 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 ATRNO75882 1429 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 RPS6KA5O75582 802 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 GGCXP38435 758 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 ACBD5Q5T8D3 534 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 WHAMMQ8TF30 809 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 MRPS27Q92552 414 aaKnown RBP12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 CUL3Q13618 768 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 ANKS4BQ8N8V4 417 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 C3orf20Q8ND61 904 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 SLC40A1Q9NP59 571 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 LRP6O75581 1613 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 H7C1W4 665 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 ECEL1O95672 775 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 SERPINB2P05120 415 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 MYSM1Q5VVJ2 828 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 SPECC1LQ69YQ0 1117 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 BRF1Q92994 677 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 ISCA1Q9BUE6 129 aa12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 ACTR5Q9H9F9 607 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF3-202ENST00000395358 GOLGA8KD6RF30 607 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 C21orf2O43822 256 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 MYBL1P10243 752 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 LACTBP83111 547 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 SUSD4Q5VX71 490 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 ZNF483Q8TF39 744 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 RGS12O14924 1447 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 CPLX1O14810 134 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 PDHBP11177 359 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 BEND6Q5SZJ8 279 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 ARMCX5Q6P1M9 558 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 DDX27Q96GQ7 796 aaKnown RBP12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 ZNF594Q96JF6 807 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 OSBPL5Q9H0X9 879 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 A0A1B0GVL5 298 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 SLC8A3P57103 927 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 NSMCE1Q8WV22 266 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 VCXQ9H320 206 aa12.66□□□□□ -0.38
RAPGEF3-202ENST00000395358 ZNF202O95125 648 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 DESP17661 470 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 HLTFQ14527 1009 aaKnown RBP eCLIP12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 CACNA2D3Q8IZS8 1091 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 CUTAO60888 179 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 PPFIA2O75334 1257 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 TFCP2Q12800 502 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 KLHL10Q6JEL2 608 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 CCDC63Q8NA47 563 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 FBF1Q8TES7 1133 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 FAXDC2Q96IV6 333 aa12.65□□□□□ -0.38
RAPGEF3-202ENST00000395358 ANKRD2Q9GZV1 360 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms