RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 FKTNO75072 461 aa23.53■■□□□ 1.36
SNCA-203ENST00000394986 KDM4AO75164 1064 aa23.53■■□□□ 1.36
SNCA-203ENST00000394986 TTLL1O95922 423 aa23.53■■□□□ 1.36
SNCA-203ENST00000394986 OSBPP22059 807 aa23.53■■□□□ 1.36
SNCA-203ENST00000394986 HOXA7P31268 230 aaPredicted RBP23.53■■□□□ 1.36
SNCA-203ENST00000394986 C17orf99Q6UX52 265 aa23.53■■□□□ 1.36
SNCA-203ENST00000394986 ESR2Q92731 530 aa23.53■■□□□ 1.36
SNCA-203ENST00000394986 P2RX7Q99572 595 aaKnown RBP23.53■■□□□ 1.36
SNCA-203ENST00000394986 STX8Q9UNK0 236 aa23.53■■□□□ 1.36
SNCA-203ENST00000394986 ECM2O94769 699 aaPredicted RBP23.52■■□□□ 1.36
SNCA-203ENST00000394986 NOM1Q5C9Z4 860 aaKnown RBP23.52■■□□□ 1.36
SNCA-203ENST00000394986 COL13A1Q5TAT6 717 aaPredicted RBP23.52■■□□□ 1.36
SNCA-203ENST00000394986 STOX1Q6ZVD7 989 aa23.52■■□□□ 1.36
SNCA-203ENST00000394986 ZKSCAN3Q9BRR0 538 aa23.52■■□□□ 1.36
SNCA-203ENST00000394986 USP17L15C9J2P7 530 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 USP17L13C9JLJ4 530 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 USP17L11C9JVI0 530 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 USP17L18D6R9N7 530 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 USP17L22D6RA61 530 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 USP17L17D6RBQ6 530 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 USP17L19D6RCP7 530 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 USP17L20D6RJB6 530 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 PEX10O60683 326 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 CAP1Q01518 475 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 USP17L24Q0WX57 530 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 CATSPERGQ6ZRH7 1159 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 LPAR1Q92633 364 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 CHMP4CQ96CF2 233 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 NUP88Q99567 741 aaPredicted RBP23.51■■□□□ 1.35
SNCA-203ENST00000394986 TANGO6Q9C0B7 1094 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 GOPCQ9HD26 462 aa23.51■■□□□ 1.35
SNCA-203ENST00000394986 NDUFB10O96000 172 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 SP3Q02447 781 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 CD99L2Q8TCZ2 262 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 MKL1Q969V6 931 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 E7EWF7 191 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 F5H6K3 240 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 SLC27A2O14975 620 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 BCRP11274 1271 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 HERVK_113P62684 666 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 KLRC3Q07444 240 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 CREB3L3Q68CJ9 461 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 RASGRP2Q7LDG7 609 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 ANKRD13CQ8N6S4 541 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 KRT23Q9C075 422 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 CNNM2Q9H8M5 875 aa23.5■■□□□ 1.35
SNCA-203ENST00000394986 CASP8AP2Q9UKL3 1982 aa23.49■■□□□ 1.35
SNCA-203ENST00000394986 WDR46O15213 610 aaKnown RBP23.49■■□□□ 1.35
SNCA-203ENST00000394986 NECTIN1Q15223 517 aa23.49■■□□□ 1.35
SNCA-203ENST00000394986 FAM83BQ5T0W9 1011 aa23.49■■□□□ 1.35
SNCA-203ENST00000394986 POTEEQ6S8J3 1075 aa23.49■■□□□ 1.35
SNCA-203ENST00000394986 ARHGAP39Q9C0H5 1083 aa23.49■■□□□ 1.35
SNCA-203ENST00000394986 TCP11L1Q9NUJ3 509 aa23.49■■□□□ 1.35
SNCA-203ENST00000394986 ZSWIM5Q9P217 1185 aa23.49■■□□□ 1.35
SNCA-203ENST00000394986 GTF3C3Q9Y5Q9 886 aa23.49■■□□□ 1.35
SNCA-203ENST00000394986 NOVP48745 357 aa23.48■■□□□ 1.35
SNCA-203ENST00000394986 RCSD1Q6JBY9 416 aa23.48■■□□□ 1.35
SNCA-203ENST00000394986 SAMD1Q6SPF0 538 aaPredicted RBP23.48■■□□□ 1.35
SNCA-203ENST00000394986 CYB5R4Q7L1T6 521 aa23.48■■□□□ 1.35
SNCA-203ENST00000394986 MTMR7Q9Y216 660 aa23.48■■□□□ 1.35
SNCA-203ENST00000394986 TRDNQ13061 729 aa23.47■■□□□ 1.35
SNCA-203ENST00000394986 GMCL1P1Q8NEA9 526 aa23.47■■□□□ 1.35
SNCA-203ENST00000394986 TMEM47Q9BQJ4 181 aa23.47■■□□□ 1.35
SNCA-203ENST00000394986 TXNRD2Q9NNW7 524 aa23.47■■□□□ 1.35
SNCA-203ENST00000394986 FBXO28Q9NVF7 368 aa23.47■■□□□ 1.35
SNCA-203ENST00000394986 SPDYE16A6NNV3 312 aaPredicted RBP23.46■■□□□ 1.35
SNCA-203ENST00000394986 LACTBP83111 547 aaPredicted RBP23.46■■□□□ 1.35
SNCA-203ENST00000394986 COL9A3Q14050 684 aaPredicted RBP23.46■■□□□ 1.35
SNCA-203ENST00000394986 PPP4R3BQ5MIZ7 849 aa23.46■■□□□ 1.35
SNCA-203ENST00000394986 SLFN13Q68D06 897 aa23.46■■□□□ 1.35
SNCA-203ENST00000394986 ERO1AQ96HE7 468 aa23.46■■□□□ 1.35
SNCA-203ENST00000394986 PAGR1Q9BTK6 254 aa23.46■■□□□ 1.35
SNCA-203ENST00000394986 FLOT1O75955 427 aa23.45■■□□□ 1.34
SNCA-203ENST00000394986 CTGFP29279 349 aa23.45■■□□□ 1.34
SNCA-203ENST00000394986 GCLCP48506 637 aaPredicted RBP23.45■■□□□ 1.34
SNCA-203ENST00000394986 RALYLQ86SE5 291 aaKnown RBP23.45■■□□□ 1.34
SNCA-203ENST00000394986 IQCA1Q86XH1 822 aa23.45■■□□□ 1.34
SNCA-203ENST00000394986 ZSCAN10Q96SZ4 725 aaPredicted RBP23.45■■□□□ 1.34
SNCA-203ENST00000394986 RBPJLQ9UBG7 517 aa23.45■■□□□ 1.34
SNCA-203ENST00000394986 SYNPO2Q9UMS6 1093 aa23.45■■□□□ 1.34
SNCA-203ENST00000394986 TNKSO95271 1327 aa23.44■■□□□ 1.34
SNCA-203ENST00000394986 MYH4Q9Y623 1939 aa23.44■■□□□ 1.34
SNCA-203ENST00000394986 TOP1P11387 765 aaKnown RBP23.44■■□□□ 1.34
SNCA-203ENST00000394986 COG2Q14746 738 aa23.44■■□□□ 1.34
SNCA-203ENST00000394986 FAM110CQ1W6H9 321 aa23.44■■□□□ 1.34
SNCA-203ENST00000394986 CHST3Q7LGC8 479 aa23.44■■□□□ 1.34
SNCA-203ENST00000394986 NCOA7Q8NI08 942 aa23.44■■□□□ 1.34
SNCA-203ENST00000394986 ISY1Q9ULR0 285 aaKnown RBP23.44■■□□□ 1.34
SNCA-203ENST00000394986 ZSWIM8A7E2V4 1837 aa23.43■■□□□ 1.34
SNCA-203ENST00000394986 CNMDO75829 334 aa23.43■■□□□ 1.34
SNCA-203ENST00000394986 MCCP23508 829 aa23.43■■□□□ 1.34
SNCA-203ENST00000394986 NT5C2P49902 561 aa23.43■■□□□ 1.34
SNCA-203ENST00000394986 CTU1Q7Z7A3 348 aaKnown RBP23.43■■□□□ 1.34
SNCA-203ENST00000394986 MB21D2Q8IYB1 491 aaPredicted RBP23.43■■□□□ 1.34
SNCA-203ENST00000394986 RASEFQ8IZ41 740 aa23.43■■□□□ 1.34
SNCA-203ENST00000394986 ENAHQ8N8S7 591 aaPredicted RBP23.43■■□□□ 1.34
SNCA-203ENST00000394986 ATG4CQ96DT6 458 aa23.43■■□□□ 1.34
SNCA-203ENST00000394986 UBAC1Q9BSL1 405 aa23.43■■□□□ 1.34
SNCA-203ENST00000394986 REC8O95072 547 aa23.42■■□□□ 1.34
SNCA-203ENST00000394986 DSG3P32926 999 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms