RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 KIAA1524Q8TCG1 905 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 CCDC51Q96ER9 411 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 CCDC97Q96F63 343 aaPredicted RBP16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 TPCN1Q9ULQ1 816 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 LAD1O00515 517 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 POLR2MP0CAP2 368 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 MYCT1Q8N699 235 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 MTMR6Q9Y217 621 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 ARHGAP6O43182 974 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 ATP2A2P16615 1042 aaKnown RBP16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 CCDC50Q8IVM0 306 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 TNS3Q68CZ2 1445 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 A0A1W2PRG0 241 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 PDIA3P30101 505 aaKnown RBP16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 CCDC26Q8TAB7 109 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 KIFC2Q96AC6 838 aa16.07■□□□□ 0.16
PPARGC1B-203ENST00000394320 LAMC1P11047 1609 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 OR52Z1P0C646 297 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 ADORA1P30542 326 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 PTPN12Q05209 780 aaKnown RBP16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 KARSQ15046 597 aaKnown RBP16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 FBXO18Q8NFZ0 1043 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 PPP1R14CQ8TAE6 165 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 TTC14Q96N46 770 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 RBSNQ9H1K0 784 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 DHX36Q9H2U1 1008 aaKnown RBP16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 EXOC3O60645 756 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 BCRP11274 1271 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 CALCOCO2Q13137 446 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 PCDHB13Q9Y5F0 798 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 RPS6KA4O75676 772 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 MSL1Q68DK7 614 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 ABCB5Q2M3G0 1257 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 PALD1Q9ULE6 856 aa16.06■□□□□ 0.16
PPARGC1B-203ENST00000394320 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.06■□□□□ 0.164e-8■■■■□ 25.9
PPARGC1B-203ENST00000394320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 ERICH4A6NGS2 130 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 ADRA2BP18089 450 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 ADD1P35611 737 aaKnown RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 LONP1P36776 959 aaKnown RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 MIER3Q7Z3K6 550 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 NELFBQ8WX92 580 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 CUEDC2Q9H467 287 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 KIAA1468Q9P260 1216 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 A0A1W2PQ27 194 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 A0A1W2PQ64 194 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 A0A1W2PQD8 194 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 KRT5P13647 590 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 MTX1Q13505 466 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 CROCC2H7BZ55 1655 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 CBX1P83916 185 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 HACE1Q8IYU2 909 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 SMCR8Q8TEV9 937 aaPredicted RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 ZNF408Q9H9D4 720 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 MRPL44Q9H9J2 332 aaKnown RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 BSDC1Q9NW68 430 aaPredicted RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 PCDHA12Q9UN75 941 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 TMEM110-MUSTN1A8MSY1 372 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 FERP16591 822 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 HOXA7P31268 230 aaPredicted RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 YWHAEP62258 255 aaKnown RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 GRAPQ13588 217 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 ERFEQ4G0M1 354 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 SYT10Q6XYQ8 523 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 GRAPLQ8TC17 118 aaPredicted RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 FOXP1Q9H334 677 aaPredicted RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 BIN2Q9UBW5 565 aaPredicted RBP16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 TSKSQ9UJT2 592 aa16.05■□□□□ 0.16
PPARGC1B-203ENST00000394320 FLOT1O75955 427 aa16.04■□□□□ 0.16
PPARGC1B-203ENST00000394320 PFKFB1P16118 471 aa16.04■□□□□ 0.16
PPARGC1B-203ENST00000394320 CCDC14Q49A88 953 aa16.04■□□□□ 0.16
PPARGC1B-203ENST00000394320 NAPGQ99747 312 aaPredicted RBP16.04■□□□□ 0.16
PPARGC1B-203ENST00000394320 AMNQ9BXJ7 453 aa16.04■□□□□ 0.16
PPARGC1B-203ENST00000394320 TRIM37O94972 964 aa16.04■□□□□ 0.16
PPARGC1B-203ENST00000394320 NPR1P16066 1061 aa16.04■□□□□ 0.16
PPARGC1B-203ENST00000394320 SULF1Q8IWU6 871 aa16.04■□□□□ 0.16
PPARGC1B-203ENST00000394320 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
PPARGC1B-203ENST00000394320 SERTAD1Q9UHV2 236 aa16.04■□□□□ 0.16
PPARGC1B-203ENST00000394320 CYP27B1O15528 508 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 GCNT3O95395 438 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 GJC1P36383 396 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 USP28Q96RU2 1077 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 KANSL2Q9H9L4 492 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 CDC42BPBQ9Y5S2 1711 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 OVOS2A0A0G2JMS6 1433 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 OVOS2A0A0J9YW53 1432 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 OVOS2Q6IE36 1432 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 GTPBP6O43824 516 aaPredicted RBP16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 HARSP12081 509 aaKnown RBP16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 KRT9P35527 623 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 SCNN1DP51172 638 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 RBM6P78332 1123 aaKnown RBP16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 TAF12Q16514 161 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 DYMQ7RTS9 669 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 SPOPO43791 374 aa16.03■□□□□ 0.16
PPARGC1B-203ENST00000394320 APOA5Q6Q788 366 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms