RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 MTMR4Q9NYA4 1195 aa25.55■■□□□ 1.68
HMGA2-203ENST00000393578 CMA1P23946 247 aa25.54■■□□□ 1.68
HMGA2-203ENST00000393578 CCDC173Q0VFZ6 552 aa25.54■■□□□ 1.68
HMGA2-203ENST00000393578 FMR1NBQ8N0W7 255 aaPredicted RBP25.54■■□□□ 1.68
HMGA2-203ENST00000393578 LARGE2Q8N3Y3 721 aa25.54■■□□□ 1.68
HMGA2-203ENST00000393578 PIM2Q9P1W9 311 aa25.54■■□□□ 1.68
HMGA2-203ENST00000393578 POLD1P28340 1107 aa25.53■■□□□ 1.68
HMGA2-203ENST00000393578 SHMT1P34896 483 aa25.53■■□□□ 1.68
HMGA2-203ENST00000393578 CKAP2LQ8IYA6 745 aa25.53■■□□□ 1.68
HMGA2-203ENST00000393578 MTFR1LQ9H019 292 aa25.53■■□□□ 1.68
HMGA2-203ENST00000393578 MYH8P13535 1937 aa25.53■■□□□ 1.68
HMGA2-203ENST00000393578 IGKV6D-41A0A0C4DH26 115 aa25.53■■□□□ 1.68
HMGA2-203ENST00000393578 AKR1B1P15121 316 aa25.53■■□□□ 1.68
HMGA2-203ENST00000393578 MARCKSP29966 332 aaPredicted RBP25.53■■□□□ 1.68
HMGA2-203ENST00000393578 ZFPM1Q8IX07 1006 aa25.53■■□□□ 1.68
HMGA2-203ENST00000393578 SH3GLB2Q9NR46 395 aa25.53■■□□□ 1.68
HMGA2-203ENST00000393578 ZNF277Q9NRM2 450 aaPredicted RBP25.53■■□□□ 1.68
HMGA2-203ENST00000393578 FAM198AQ9UFP1 575 aa25.53■■□□□ 1.68
HMGA2-203ENST00000393578 A0A1B0GVL5 298 aa25.52■■□□□ 1.68
HMGA2-203ENST00000393578 NPY5RQ15761 445 aa25.52■■□□□ 1.68
HMGA2-203ENST00000393578 UVSSAQ2YD98 709 aa25.52■■□□□ 1.68
HMGA2-203ENST00000393578 RSBN1LQ6PCB5 846 aaPredicted RBP25.52■■□□□ 1.68
HMGA2-203ENST00000393578 PPP1R9BQ96SB3 815 aa25.52■■□□□ 1.68
HMGA2-203ENST00000393578 CABP5Q9NP86 173 aa25.52■■□□□ 1.68
HMGA2-203ENST00000393578 PARP1P09874 1014 aaKnown RBP25.51■■□□□ 1.67
HMGA2-203ENST00000393578 NDUFA8P51970 172 aa25.51■■□□□ 1.67
HMGA2-203ENST00000393578 CACNB3P54284 484 aa25.51■■□□□ 1.67
HMGA2-203ENST00000393578 CFAP100Q494V2 611 aa25.51■■□□□ 1.67
HMGA2-203ENST00000393578 GOLGB1Q14789 3259 aaKnown RBP25.51■■□□□ 1.67
HMGA2-203ENST00000393578 BAZ2BQ9UIF8 2168 aaKnown RBP25.51■■□□□ 1.67
HMGA2-203ENST00000393578 KLRF2D3W0D1 207 aa25.51■■□□□ 1.67
HMGA2-203ENST00000393578 VIL1P09327 827 aaKnown RBP25.51■■□□□ 1.67
HMGA2-203ENST00000393578 TYRO3Q06418 890 aa25.51■■□□□ 1.67
HMGA2-203ENST00000393578 SPZ1Q9BXG8 430 aa25.51■■□□□ 1.67
HMGA2-203ENST00000393578 PI4KBQ9UBF8 816 aa25.51■■□□□ 1.67
HMGA2-203ENST00000393578 SMARCA1P28370 1054 aa25.5■■□□□ 1.67
HMGA2-203ENST00000393578 NLRP5P59047 1200 aa25.5■■□□□ 1.67
HMGA2-203ENST00000393578 TCP10Q12799 353 aa25.5■■□□□ 1.67
HMGA2-203ENST00000393578 PIBF1Q8WXW3 757 aa25.5■■□□□ 1.67
HMGA2-203ENST00000393578 TNFRSF25Q93038 417 aa25.5■■□□□ 1.67
HMGA2-203ENST00000393578 CCDC17Q96LX7 622 aa25.5■■□□□ 1.67
HMGA2-203ENST00000393578 CEP131Q9UPN4 1083 aa25.5■■□□□ 1.67
HMGA2-203ENST00000393578 MTMR7Q9Y216 660 aa25.5■■□□□ 1.67
HMGA2-203ENST00000393578 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
HMGA2-203ENST00000393578 CYTH3O43739 400 aa25.49■■□□□ 1.67
HMGA2-203ENST00000393578 CUTAO60888 179 aa25.49■■□□□ 1.67
HMGA2-203ENST00000393578 CALML3P27482 149 aa25.49■■□□□ 1.67
HMGA2-203ENST00000393578 TTLL1O95922 423 aa25.49■■□□□ 1.67
HMGA2-203ENST00000393578 VEGFAP15692 232 aaPredicted RBP25.49■■□□□ 1.67
HMGA2-203ENST00000393578 SLC35G1Q2M3R5 365 aa25.49■■□□□ 1.67
HMGA2-203ENST00000393578 SASS6Q6UVJ0 657 aa25.49■■□□□ 1.67
HMGA2-203ENST00000393578 FAM177A1Q8N128 213 aaPredicted RBP25.49■■□□□ 1.67
HMGA2-203ENST00000393578 DDTLA6NHG4 134 aaPredicted RBP25.48■■□□□ 1.67
HMGA2-203ENST00000393578 PPP4R3BQ5MIZ7 849 aa25.48■■□□□ 1.67
HMGA2-203ENST00000393578 KRI1Q8N9T8 703 aaKnown RBP25.48■■□□□ 1.67
HMGA2-203ENST00000393578 GMLQ99445 158 aa25.48■■□□□ 1.67
HMGA2-203ENST00000393578 TDRD3Q9H7E2 651 aaKnown RBP25.48■■□□□ 1.67
HMGA2-203ENST00000393578 PCDHB6Q9Y5E3 794 aa25.48■■□□□ 1.67
HMGA2-203ENST00000393578 MRVI1Q9Y6F6 885 aa25.48■■□□□ 1.67
HMGA2-203ENST00000393578 MORC2Q9Y6X9 1032 aaPredicted RBP25.48■■□□□ 1.67
HMGA2-203ENST00000393578 COL4A5P29400 1685 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 PSMD14O00487 310 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 ENTPD3O75355 529 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 RAD17O75943 681 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 GOLGA8HP0CJ92 632 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 PRMT6Q96LA8 375 aaPredicted RBP25.47■■□□□ 1.67
HMGA2-203ENST00000393578 FAM237AA0A1B0GTK4 181 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 PFKFB1P16118 471 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 DALRD3Q5D0E6 543 aaKnown RBP25.47■■□□□ 1.67
HMGA2-203ENST00000393578 USP17L2Q6R6M4 530 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 SH3BP5LQ7L8J4 393 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 FOXP4Q8IVH2 680 aaPredicted RBP25.47■■□□□ 1.67
HMGA2-203ENST00000393578 ZSCAN29Q8IWY8 852 aaPredicted RBP25.47■■□□□ 1.67
HMGA2-203ENST00000393578 DNAJC18Q9H819 358 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 ZNRF3Q9ULT6 936 aa25.47■■□□□ 1.67
HMGA2-203ENST00000393578 NOL7Q9UMY1 257 aaKnown RBP25.47■■□□□ 1.67
HMGA2-203ENST00000393578 TRIM75PA6NK02 468 aa25.46■■□□□ 1.67
HMGA2-203ENST00000393578 EARS2Q5JPH6 523 aaKnown RBP25.46■■□□□ 1.67
HMGA2-203ENST00000393578 RESP18Q5W5W9 173 aa25.46■■□□□ 1.67
HMGA2-203ENST00000393578 SHC4Q6S5L8 630 aa25.46■■□□□ 1.67
HMGA2-203ENST00000393578 NIM1KQ8IY84 436 aa25.46■■□□□ 1.67
HMGA2-203ENST00000393578 HDAC9Q9UKV0 1011 aa25.46■■□□□ 1.67
HMGA2-203ENST00000393578 SIPA1L1O43166 1804 aa25.46■■□□□ 1.67
HMGA2-203ENST00000393578 ATRNL1Q5VV63 1379 aa25.46■■□□□ 1.67
HMGA2-203ENST00000393578 GREB1LQ9C091 1923 aaPredicted RBP25.46■■□□□ 1.67
HMGA2-203ENST00000393578 ZNF202O95125 648 aa25.45■■□□□ 1.67
HMGA2-203ENST00000393578 PDHBP11177 359 aa25.45■■□□□ 1.67
HMGA2-203ENST00000393578 PDLIM2Q96JY6 352 aa25.45■■□□□ 1.67
HMGA2-203ENST00000393578 SDF4Q9BRK5 362 aa25.45■■□□□ 1.67
HMGA2-203ENST00000393578 CLIP2Q9UDT6 1046 aa25.45■■□□□ 1.67
HMGA2-203ENST00000393578 HPSEQ9Y251 543 aa25.45■■□□□ 1.67
HMGA2-203ENST00000393578 COL2A1P02458 1487 aaPredicted RBP25.45■■□□□ 1.66
HMGA2-203ENST00000393578 FAM205CA6NFA0 338 aa25.45■■□□□ 1.66
HMGA2-203ENST00000393578 USP17L5A8MUK1 530 aa25.45■■□□□ 1.66
HMGA2-203ENST00000393578 SNHG28P0DPA3 235 aa25.45■■□□□ 1.66
HMGA2-203ENST00000393578 PTPREP23469 700 aa25.45■■□□□ 1.66
HMGA2-203ENST00000393578 ASPRV1Q53RT3 343 aa25.45■■□□□ 1.66
HMGA2-203ENST00000393578 GALNT17Q6IS24 598 aa25.45■■□□□ 1.66
HMGA2-203ENST00000393578 RASGRP2Q7LDG7 609 aa25.45■■□□□ 1.66
HMGA2-203ENST00000393578 METTL16Q86W50 562 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms