RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 CMA1P23946 247 aa23.32■■□□□ 1.32
ME3-202ENST00000393324 BRMS1Q9HCU9 246 aa23.32■■□□□ 1.32
ME3-202ENST00000393324 SERPINA10Q9UK55 444 aa23.32■■□□□ 1.32
ME3-202ENST00000393324 HLA-DOAP06340 250 aa23.32■■□□□ 1.32
ME3-202ENST00000393324 SASS6Q6UVJ0 657 aa23.32■■□□□ 1.32
ME3-202ENST00000393324 SWAP70Q9UH65 585 aa23.32■■□□□ 1.32
ME3-202ENST00000393324 MRVI1Q9Y6F6 885 aa23.32■■□□□ 1.32
ME3-202ENST00000393324 PALM3A6NDB9 673 aaPredicted RBP23.31■■□□□ 1.32
ME3-202ENST00000393324 TOP1P11387 765 aaKnown RBP23.31■■□□□ 1.32
ME3-202ENST00000393324 VEGFAP15692 232 aaPredicted RBP23.31■■□□□ 1.32
ME3-202ENST00000393324 NOVP48745 357 aa23.31■■□□□ 1.32
ME3-202ENST00000393324 PLIN4Q96Q06 1357 aa23.31■■□□□ 1.32
ME3-202ENST00000393324 CACNB3P54284 484 aa23.31■■□□□ 1.32
ME3-202ENST00000393324 NPY5RQ15761 445 aa23.31■■□□□ 1.32
ME3-202ENST00000393324 AKR1B1P15121 316 aa23.3■■□□□ 1.32
ME3-202ENST00000393324 ZFPM1Q8IX07 1006 aa23.3■■□□□ 1.32
ME3-202ENST00000393324 PDLIM2Q96JY6 352 aa23.3■■□□□ 1.32
ME3-202ENST00000393324 PSMD1Q99460 953 aa23.3■■□□□ 1.32
ME3-202ENST00000393324 PCDHB6Q9Y5E3 794 aa23.3■■□□□ 1.32
ME3-202ENST00000393324 NLRP5P59047 1200 aa23.29■■□□□ 1.32
ME3-202ENST00000393324 TRIM44Q96DX7 344 aaPredicted RBP23.29■■□□□ 1.32
ME3-202ENST00000393324 GOLGA8HP0CJ92 632 aa23.29■■□□□ 1.32
ME3-202ENST00000393324 PFKFB1P16118 471 aa23.29■■□□□ 1.32
ME3-202ENST00000393324 ATP2B1P20020 1258 aa23.29■■□□□ 1.32
ME3-202ENST00000393324 TCP10Q12799 353 aa23.29■■□□□ 1.32
ME3-202ENST00000393324 LZTS2Q9BRK4 669 aa23.29■■□□□ 1.32
ME3-202ENST00000393324 MTMR4Q9NYA4 1195 aa23.29■■□□□ 1.32
ME3-202ENST00000393324 FAM205CA6NFA0 338 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 KLRF2D3W0D1 207 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 CYTH3O43739 400 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 CUTAO60888 179 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 SHMT1P34896 483 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 SLC35G1Q2M3R5 365 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 EARS2Q5JPH6 523 aaKnown RBP23.28■■□□□ 1.32
ME3-202ENST00000393324 SHC4Q6S5L8 630 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 RASGRP2Q7LDG7 609 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 CLIC6Q96NY7 704 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 SDF4Q9BRK5 362 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 IDI2Q9BXS1 227 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 MYO3BQ8WXR4 1341 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 KIF13BQ9NQT8 1826 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 ZNF202O95125 648 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 ZBTB7AO95365 584 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 PARP1P09874 1014 aaKnown RBP23.28■■□□□ 1.32
ME3-202ENST00000393324 ANO6Q4KMQ2 910 aa23.28■■□□□ 1.32
ME3-202ENST00000393324 KRI1Q8N9T8 703 aaKnown RBP23.28■■□□□ 1.32
ME3-202ENST00000393324 FAM200AQ8TCP9 573 aa23.27■■□□□ 1.32
ME3-202ENST00000393324 TNFRSF25Q93038 417 aa23.27■■□□□ 1.32
ME3-202ENST00000393324 EHD4Q9H223 541 aa23.27■■□□□ 1.32
ME3-202ENST00000393324 ZNF277Q9NRM2 450 aaPredicted RBP23.27■■□□□ 1.32
ME3-202ENST00000393324 FAM198AQ9UFP1 575 aa23.27■■□□□ 1.32
ME3-202ENST00000393324 CEP131Q9UPN4 1083 aa23.27■■□□□ 1.32
ME3-202ENST00000393324 PSME4Q14997 1843 aa23.27■■□□□ 1.32
ME3-202ENST00000393324 IGKV6D-41A0A0C4DH26 115 aa23.27■■□□□ 1.31
ME3-202ENST00000393324 USP17L2Q6R6M4 530 aa23.27■■□□□ 1.31
ME3-202ENST00000393324 LARGE2Q8N3Y3 721 aa23.27■■□□□ 1.31
ME3-202ENST00000393324 GPKOWQ92917 476 aaPredicted RBP eCLIP23.27■■□□□ 1.31
ME3-202ENST00000393324 DHX36Q9H2U1 1008 aaKnown RBP23.27■■□□□ 1.31
ME3-202ENST00000393324 SH3GLB2Q9NR46 395 aa23.27■■□□□ 1.31
ME3-202ENST00000393324 RESP18Q5W5W9 173 aa23.26■■□□□ 1.31
ME3-202ENST00000393324 CCDC125Q86Z20 511 aa23.26■■□□□ 1.31
ME3-202ENST00000393324 NAP1L5Q96NT1 182 aaPredicted RBP23.26■■□□□ 1.31
ME3-202ENST00000393324 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.25■■□□□ 1.31
ME3-202ENST00000393324 CFAP100Q494V2 611 aa23.25■■□□□ 1.31
ME3-202ENST00000393324 SPZ1Q9BXG8 430 aa23.25■■□□□ 1.31
ME3-202ENST00000393324 HPSEQ9Y251 543 aa23.25■■□□□ 1.31
ME3-202ENST00000393324 DDTLA6NHG4 134 aaPredicted RBP23.25■■□□□ 1.31
ME3-202ENST00000393324 TRIM75PA6NK02 468 aa23.25■■□□□ 1.31
ME3-202ENST00000393324 CALML3P27482 149 aa23.25■■□□□ 1.31
ME3-202ENST00000393324 SYKP43405 635 aa23.25■■□□□ 1.31
ME3-202ENST00000393324 EIF6P56537 245 aaKnown RBP23.25■■□□□ 1.31
ME3-202ENST00000393324 TDRD3Q9H7E2 651 aaKnown RBP23.25■■□□□ 1.31
ME3-202ENST00000393324 NOL7Q9UMY1 257 aaKnown RBP23.25■■□□□ 1.31
ME3-202ENST00000393324 NPM3O75607 178 aaKnown RBP23.24■■□□□ 1.31
ME3-202ENST00000393324 SLURP2P0DP57 97 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 PTPREP23469 700 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 NOM1Q5C9Z4 860 aaKnown RBP23.24■■□□□ 1.31
ME3-202ENST00000393324 ZSCAN29Q8IWY8 852 aaPredicted RBP23.24■■□□□ 1.31
ME3-202ENST00000393324 CPVLQ9H3G5 476 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 PI4KBQ9UBF8 816 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 USP25Q9UHP3 1055 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 FBXO2Q9UK22 296 aaPredicted RBP23.24■■□□□ 1.31
ME3-202ENST00000393324 FAM237AA0A1B0GTK4 181 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 USP17L5A8MUK1 530 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 RAD17O75943 681 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 TTLL1O95922 423 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 CLEC10AQ8IUN9 316 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 CLIP2Q9UDT6 1046 aa23.24■■□□□ 1.31
ME3-202ENST00000393324 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
ME3-202ENST00000393324 SIPA1L1O43166 1804 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 MPHOSPH10O00566 681 aaKnown RBP23.23■■□□□ 1.31
ME3-202ENST00000393324 RSBN1LQ6PCB5 846 aaPredicted RBP23.23■■□□□ 1.31
ME3-202ENST00000393324 SH3BP5LQ7L8J4 393 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 LRRC47Q8N1G4 583 aaKnown RBP23.23■■□□□ 1.31
ME3-202ENST00000393324 ERCC4Q92889 916 aaPredicted RBP23.23■■□□□ 1.31
ME3-202ENST00000393324 PRMT6Q96LA8 375 aaPredicted RBP23.23■■□□□ 1.31
ME3-202ENST00000393324 DNAJC25Q9H1X3 360 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 DNAJC18Q9H819 358 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 PIM2Q9P1W9 311 aa23.23■■□□□ 1.31
ME3-202ENST00000393324 PDHBP11177 359 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms