RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 INF2Q27J81 1249 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 ERCC6LQ2NKX8 1250 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 RESP18Q5W5W9 173 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 FERMT2Q96AC1 680 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
CALD1-203ENST00000393118 GPCPD1Q9NPB8 672 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
CALD1-203ENST00000393118 WDR19Q8NEZ3 1342 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 LOC102724159A0A0B4J2E5 919 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 GOLGA6L9A6NEM1 432 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 TMEM232C9JQI7 657 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 PSMA7O14818 248 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 CLGNO14967 610 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 NCBP1Q09161 790 aaKnown RBP11.88□□□□□ -0.51
CALD1-203ENST00000393118 PWP2Q15269 919 aaKnown RBP11.88□□□□□ -0.51
CALD1-203ENST00000393118 TMEM266Q2M3C6 531 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 INTS5Q6P9B9 1019 aaKnown RBP11.88□□□□□ -0.51
CALD1-203ENST00000393118 USP49Q70CQ1 688 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 PUF60Q9UHX1 559 aaKnown RBP11.88□□□□□ -0.51
CALD1-203ENST00000393118 PARP1P09874 1014 aaKnown RBP11.88□□□□□ -0.51
CALD1-203ENST00000393118 DNA2P51530 1060 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 GRIN1Q05586 938 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 AXDND1Q5T1B0 1012 aaPredicted RBP11.88□□□□□ -0.51
CALD1-203ENST00000393118 CCDC70Q6NSX1 233 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 GIMAP7Q8NHV1 300 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 RRP36Q96EU6 259 aaKnown RBP11.88□□□□□ -0.51
CALD1-203ENST00000393118 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 PYM1Q9BRP8 204 aaKnown RBP11.88□□□□□ -0.51
CALD1-203ENST00000393118 ZC3H12CQ9C0D7 883 aaKnown RBP11.88□□□□□ -0.51
CALD1-203ENST00000393118 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 FAM196AQ6ZSG2 479 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 CPVLQ9H3G5 476 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 C6orf50Q9HD87 102 aa11.88□□□□□ -0.51
CALD1-203ENST00000393118 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 IKBKBO14920 756 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 ARHGAP6O43182 974 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 CCNT1O60563 726 aaKnown RBP11.87□□□□□ -0.51
CALD1-203ENST00000393118 NTSR2O95665 410 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 PTPREP23469 700 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 ZNF569Q5MCW4 686 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 MFSD14BQ5SR56 506 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 PPP1R13BQ96KQ4 1090 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 GGA1Q9UJY5 639 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 CALRP27797 417 aaKnown RBP11.87□□□□□ -0.51
CALD1-203ENST00000393118 BLIDQ8IZY5 108 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 MYCBPQ99417 103 aaPredicted RBP11.87□□□□□ -0.51
CALD1-203ENST00000393118 CENPHQ9H3R5 247 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 ST7Q9NRC1 585 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 ATP8A2Q9NTI2 1148 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 TXKP42681 527 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 SPAG1Q07617 926 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 FKBP15Q5T1M5 1219 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 METTL16Q86W50 562 aaKnown RBP11.87□□□□□ -0.51
CALD1-203ENST00000393118 SLC44A5Q8NCS7 719 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 DPF2Q92785 391 aa11.87□□□□□ -0.51
CALD1-203ENST00000393118 ZNF512BQ96KM6 892 aaPredicted RBP11.87□□□□□ -0.51
CALD1-203ENST00000393118 SMIM22K7EJ46 135 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 CAPN2P17655 700 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 WWC2Q6AWC2 1192 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 CLEC4GQ6UXB4 293 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 RBM43Q6ZSC3 357 aaKnown RBP11.86□□□□□ -0.51
CALD1-203ENST00000393118 RAB34Q9BZG1 259 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 SRPRBQ9Y5M8 271 aaKnown RBP11.86□□□□□ -0.51
CALD1-203ENST00000393118 MED1Q15648 1581 aaPredicted RBP11.86□□□□□ -0.51
CALD1-203ENST00000393118 KLRK1P26718 216 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 EYA3Q99504 573 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■■□□ 17.8
CALD1-203ENST00000393118 CHD2O14647 1828 aaKnown RBP11.86□□□□□ -0.51
CALD1-203ENST00000393118 ETF1P62495 437 aaKnown RBP11.86□□□□□ -0.51
CALD1-203ENST00000393118 GTF2IP78347 998 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 PAK1Q13153 545 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 ZSCAN26Q16670 478 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
CALD1-203ENST00000393118 GUCA1BQ9UMX6 200 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 KLRF2D3W0D1 207 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 DDAH1O94760 285 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 ZNF76P36508 570 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 EVCP57679 992 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 AMPD3Q01432 767 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 E2F4Q16254 413 aa11.86□□□□□ -0.51
CALD1-203ENST00000393118 SRRTQ9BXP5 876 aaKnown RBP11.86□□□□□ -0.51
CALD1-203ENST00000393118 FGFR2P21802 821 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 GNA11P29992 359 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 CT47A1Q5JQC4 288 aaPredicted RBP11.85□□□□□ -0.51
CALD1-203ENST00000393118 CACNA2D4Q7Z3S7 1137 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 NELFBQ8WX92 580 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 SALL1Q9NSC2 1324 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 BTDP43251 543 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 PLCD1P51178 756 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 MCM6Q14566 821 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 ADGRA1Q86SQ6 560 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 TEX2Q8IWB9 1127 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 MICALL1Q8N3F8 863 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 DDX41Q9UJV9 622 aaKnown RBP11.85□□□□□ -0.51
CALD1-203ENST00000393118 PNPLA7Q6ZV29 1317 aa11.85□□□□□ -0.51
CALD1-203ENST00000393118 PRPF3O43395 683 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms