RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MYZAPP0CAP1 466 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 MAEAQ7L5Y9 396 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 KIAA0753Q2KHM9 967 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 TSGA10Q9BZW7 698 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 SPATA31D1Q6ZQQ2 1576 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 MECOMQ03112 1051 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 MAATS1Q7Z4T9 603 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 DBNDD1Q9H9R9 158 aa18.56■□□□□ 0.56
SCN3B-202ENST00000392770 SMTNP53814 917 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 ICA1Q05084 483 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 RAD51AP2Q09MP3 1159 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 CUL4AQ13619 759 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 VTI1AQ96AJ9 217 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 TAB2Q9NYJ8 693 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.55■□□□□ 0.56
SCN3B-202ENST00000392770 V9GYY5 206 aaPredicted RBP18.55■□□□□ 0.56
SCN3B-202ENST00000392770 CDHR2Q9BYE9 1310 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 CMA1P23946 247 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 TECP42680 631 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 NSMFQ6X4W1 530 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 KIAA1468Q9P260 1216 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 H7C1D1 291 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 PRPHP41219 470 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 GOLGA1Q92805 767 aa18.55■□□□□ 0.56
SCN3B-202ENST00000392770 GPR101Q96P66 508 aaPredicted RBP18.55■□□□□ 0.56
SCN3B-202ENST00000392770 TNFAIP1Q13829 316 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 ZRSR2Q15696 482 aaKnown RBP18.54■□□□□ 0.56
SCN3B-202ENST00000392770 CHURC1Q8WUH1 139 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 TMEM131LA2VDJ0 1609 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 SPDYE4A6NLX3 237 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 BMS1Q14692 1282 aaKnown RBP18.54■□□□□ 0.56
SCN3B-202ENST00000392770 GALNT17Q6IS24 598 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 CYP26C1Q6V0L0 522 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 FBXO18Q8NFZ0 1043 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 SHTN1A0MZ66 631 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 NDUFA8P51970 172 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 NCBP1Q09161 790 aaKnown RBP18.54■□□□□ 0.56
SCN3B-202ENST00000392770 SLFNL1Q499Z3 407 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 HERC4Q5GLZ8 1057 aaPredicted RBP18.54■□□□□ 0.56
SCN3B-202ENST00000392770 IMPACTQ9P2X3 320 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 PLVAPQ9BX97 442 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 HOOK3Q86VS8 718 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 SWAP70Q9UH65 585 aa18.54■□□□□ 0.56
SCN3B-202ENST00000392770 AFF2P51816 1311 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 CCDC122Q5T0U0 273 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 NEK8Q86SG6 692 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 MYCT1Q8N699 235 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 FOXO4P98177 505 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 TBC1D9BQ66K14 1250 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 PRDM10Q9NQV6 1147 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 ABCB5Q2M3G0 1257 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 DPH6Q7L8W6 267 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 NELFCDQ8IXH7 590 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 AS3MTQ9HBK9 375 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 RTEL1Q9NZ71 1219 aa18.53■□□□□ 0.56
SCN3B-202ENST00000392770 VWDEQ8N2E2 1590 aa18.52■□□□□ 0.56
SCN3B-202ENST00000392770 GJC1P36383 396 aa18.52■□□□□ 0.56
SCN3B-202ENST00000392770 ISCA1Q9BUE6 129 aa18.52■□□□□ 0.56
SCN3B-202ENST00000392770 KDM3AQ9Y4C1 1321 aa18.52■□□□□ 0.56
SCN3B-202ENST00000392770 KIF20BQ96Q89 1820 aa18.52■□□□□ 0.56
SCN3B-202ENST00000392770 CYP2D7A0A087X1C5 515 aa18.52■□□□□ 0.56
SCN3B-202ENST00000392770 CETN3O15182 167 aa18.52■□□□□ 0.56
SCN3B-202ENST00000392770 SLFN13Q68D06 897 aa18.52■□□□□ 0.56
SCN3B-202ENST00000392770 HSF2BPO75031 334 aa18.52■□□□□ 0.56
SCN3B-202ENST00000392770 FNBP4Q8N3X1 1017 aaPredicted RBP18.52■□□□□ 0.56
SCN3B-202ENST00000392770 NARFQ9UHQ1 456 aa18.52■□□□□ 0.56
SCN3B-202ENST00000392770 SOS2Q07890 1332 aaPredicted RBP18.52■□□□□ 0.56
SCN3B-202ENST00000392770 NBPF26B4DH59 902 aa18.52■□□□□ 0.55
SCN3B-202ENST00000392770 OR52Z1P0C646 297 aa18.52■□□□□ 0.55
SCN3B-202ENST00000392770 HARSP12081 509 aaKnown RBP18.52■□□□□ 0.55
SCN3B-202ENST00000392770 NBPF10Q6P3W6 841 aaKnown RBP18.52■□□□□ 0.55
SCN3B-202ENST00000392770 KRBA2Q6ZNG9 492 aa18.52■□□□□ 0.55
SCN3B-202ENST00000392770 NBPF15Q8N660 670 aa18.52■□□□□ 0.55
SCN3B-202ENST00000392770 IFT74Q96LB3 600 aa18.52■□□□□ 0.55
SCN3B-202ENST00000392770 NT5C3AQ9H0P0 336 aa18.52■□□□□ 0.55
SCN3B-202ENST00000392770 USP17L8P0C7I0 530 aa18.52■□□□□ 0.55
SCN3B-202ENST00000392770 MRPL44Q9H9J2 332 aaKnown RBP18.52■□□□□ 0.55
SCN3B-202ENST00000392770 DDX25Q9UHL0 483 aaKnown RBP18.52■□□□□ 0.55
SCN3B-202ENST00000392770 EXOC7Q9UPT5 735 aa18.52■□□□□ 0.55
SCN3B-202ENST00000392770 GCNT3O95395 438 aa18.51■□□□□ 0.55
SCN3B-202ENST00000392770 PRR16Q569H4 304 aa18.51■□□□□ 0.55
SCN3B-202ENST00000392770 RNF26Q9BY78 433 aaPredicted RBP18.51■□□□□ 0.55
SCN3B-202ENST00000392770 ZSWIM5Q9P217 1185 aa18.51■□□□□ 0.55
SCN3B-202ENST00000392770 FBXO11Q86XK2 927 aa18.51■□□□□ 0.55
SCN3B-202ENST00000392770 TPH2Q8IWU9 490 aa18.51■□□□□ 0.55
SCN3B-202ENST00000392770 SYMPKQ92797 1274 aaKnown RBP18.51■□□□□ 0.55
SCN3B-202ENST00000392770 FOXP1Q9H334 677 aaPredicted RBP18.51■□□□□ 0.55
SCN3B-202ENST00000392770 DKC1O60832 514 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCN3B-202ENST00000392770 CLRN2A0PK11 232 aa18.5■□□□□ 0.55
SCN3B-202ENST00000392770 EEF2P13639 858 aaKnown RBP18.5■□□□□ 0.55
SCN3B-202ENST00000392770 ERCC3P19447 782 aa18.5■□□□□ 0.55
SCN3B-202ENST00000392770 FNBP1Q96RU3 617 aa18.5■□□□□ 0.55
SCN3B-202ENST00000392770 RASAL2Q9UJF2 1139 aa18.5■□□□□ 0.55
SCN3B-202ENST00000392770 KRT5P13647 590 aa18.5■□□□□ 0.55
SCN3B-202ENST00000392770 DIXDC1Q155Q3 683 aa18.5■□□□□ 0.55
SCN3B-202ENST00000392770 DYNLL2Q96FJ2 89 aa18.5■□□□□ 0.55
SCN3B-202ENST00000392770 NUP58Q9BVL2 599 aa18.5■□□□□ 0.55
SCN3B-202ENST00000392770 TMEM232C9JQI7 657 aa18.5■□□□□ 0.55
SCN3B-202ENST00000392770 STRN3Q13033 797 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms