RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 CCDC93Q567U6 631 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 SPTY2D1Q68D10 685 aaPredicted RBP14.01□□□□□ -0.17
RFC5-201ENST00000392542 TPTE2Q6XPS3 522 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 ZNF397Q8NF99 534 aaPredicted RBP14.01□□□□□ -0.17
RFC5-201ENST00000392542 BCL11BQ9C0K0 894 aaPredicted RBP14.01□□□□□ -0.17
RFC5-201ENST00000392542 TSPY2A6NKD2 308 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 NLRP5P59047 1200 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 DPYDQ12882 1025 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 PTGDRQ13258 359 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 NR1I3Q14994 352 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.01□□□□□ -0.17
RFC5-201ENST00000392542 V9GYY5 206 aaPredicted RBP14.01□□□□□ -0.17
RFC5-201ENST00000392542 BTAF1O14981 1849 aa14.01□□□□□ -0.17
RFC5-201ENST00000392542 BAZ2BQ9UIF8 2168 aaKnown RBP14□□□□□ -0.17
RFC5-201ENST00000392542 A0A1B0GTH6 734 aa14□□□□□ -0.17
RFC5-201ENST00000392542 VWA3AA6NCI4 1184 aa14□□□□□ -0.17
RFC5-201ENST00000392542 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
RFC5-201ENST00000392542 TM4SF1P30408 202 aa14□□□□□ -0.17
RFC5-201ENST00000392542 CUL4BQ13620 913 aa14□□□□□ -0.17
RFC5-201ENST00000392542 SPATA1Q5VX52 437 aa14□□□□□ -0.17
RFC5-201ENST00000392542 RCSD1Q6JBY9 416 aa14□□□□□ -0.17
RFC5-201ENST00000392542 TRIM65Q6PJ69 517 aa14□□□□□ -0.17
RFC5-201ENST00000392542 PTF1AQ7RTS3 328 aa14□□□□□ -0.17
RFC5-201ENST00000392542 TXNRD3Q86VQ6 643 aa14□□□□□ -0.17
RFC5-201ENST00000392542 DZIP1Q86YF9 867 aaKnown RBP14□□□□□ -0.17
RFC5-201ENST00000392542 CCDC24Q8N4L8 307 aa14□□□□□ -0.17
RFC5-201ENST00000392542 TC2NQ8N9U0 490 aa14□□□□□ -0.17
RFC5-201ENST00000392542 GSDMAQ96QA5 445 aa14□□□□□ -0.17
RFC5-201ENST00000392542 BAG1Q99933 345 aaPredicted RBP14□□□□□ -0.17
RFC5-201ENST00000392542 SYNRGQ9UMZ2 1314 aa14□□□□□ -0.17
RFC5-201ENST00000392542 SBF2Q86WG5 1849 aa14□□□□□ -0.17
RFC5-201ENST00000392542 GNPATO15228 680 aa14□□□□□ -0.17
RFC5-201ENST00000392542 STX10O60499 249 aa14□□□□□ -0.17
RFC5-201ENST00000392542 KIF5BP33176 963 aa14□□□□□ -0.17
RFC5-201ENST00000392542 NT5C2P49902 561 aa14□□□□□ -0.17
RFC5-201ENST00000392542 ELF2Q15723 593 aa14□□□□□ -0.17
RFC5-201ENST00000392542 ZMYND15Q9H091 742 aa14□□□□□ -0.17
RFC5-201ENST00000392542 MCM9Q9NXL9 1143 aa14□□□□□ -0.17
RFC5-201ENST00000392542 TNRC6CQ9HCJ0 1690 aaKnown RBP14□□□□□ -0.17
RFC5-201ENST00000392542 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
RFC5-201ENST00000392542 CASP1P29466 404 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 PIK3AP1Q6ZUJ8 805 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 OGFRQ9NZT2 677 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 DNAI1Q9UI46 699 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 JAG2Q9Y219 1238 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 PPP2R2CQ9Y2T4 447 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.99□□□□□ -0.173e-6■□□□□ 9.4
RFC5-201ENST00000392542 IGSF3O75054 1194 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 USP17L8P0C7I0 530 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 VPS72Q15906 364 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 E2F4Q16254 413 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 PYM1Q9BRP8 204 aaKnown RBP13.99□□□□□ -0.17
RFC5-201ENST00000392542 KAT14Q9H8E8 782 aa13.99□□□□□ -0.17
RFC5-201ENST00000392542 GOLGA6L9A6NEM1 432 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 PPP1R3GB7ZBB8 358 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 CALML3P27482 149 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 ADKP55263 362 aaKnown RBP13.98□□□□□ -0.17
RFC5-201ENST00000392542 C12orf60Q5U649 245 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 KLHL10Q6JEL2 608 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 APTXQ7Z2E3 356 aaKnown RBP13.98□□□□□ -0.17
RFC5-201ENST00000392542 IQUBQ8NA54 791 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 MKRN1Q9UHC7 482 aaKnown RBP13.98□□□□□ -0.17
RFC5-201ENST00000392542 RTCBQ9Y3I0 505 aaKnown RBP13.98□□□□□ -0.17
RFC5-201ENST00000392542 NHSQ6T4R5 1651 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 VEGFAP15692 232 aaPredicted RBP13.98□□□□□ -0.17
RFC5-201ENST00000392542 STX17P56962 302 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 TFAP4Q01664 338 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 KMT5BQ4FZB7 885 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 CDKAL1Q5VV42 579 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 DGKHQ86XP1 1220 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 ANKS1AQ92625 1134 aa13.98□□□□□ -0.17
RFC5-201ENST00000392542 DDX41Q9UJV9 622 aaKnown RBP13.98□□□□□ -0.17
RFC5-201ENST00000392542 XDHP47989 1333 aa13.97□□□□□ -0.17
RFC5-201ENST00000392542 ROBO3Q96MS0 1386 aa13.97□□□□□ -0.17
RFC5-201ENST00000392542 NAV1Q8NEY1 1877 aa13.97□□□□□ -0.17
RFC5-201ENST00000392542 ADAMTS3O15072 1205 aa13.97□□□□□ -0.17
RFC5-201ENST00000392542 USP5P45974 858 aa13.97□□□□□ -0.17
RFC5-201ENST00000392542 BLIDQ8IZY5 108 aa13.97□□□□□ -0.17
RFC5-201ENST00000392542 WDR66Q8TBY9 1149 aa13.97□□□□□ -0.17
RFC5-201ENST00000392542 SH3GLB2Q9NR46 395 aa13.97□□□□□ -0.17
RFC5-201ENST00000392542 LDHBP07195 334 aaKnown RBP13.96□□□□□ -0.17
RFC5-201ENST00000392542 MCM7P33993 719 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 IL17AQ16552 155 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 PDXDC2PQ6P474 469 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 FBXO38Q6PIJ6 1188 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 PNMA1Q8ND90 353 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 ARHGEF1Q92888 912 aaKnown RBP13.96□□□□□ -0.17
RFC5-201ENST00000392542 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 IL17RBQ9NRM6 502 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 CCNL1Q9UK58 526 aaPredicted RBP13.96□□□□□ -0.17
RFC5-201ENST00000392542 LEMD3Q9Y2U8 911 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 TAF1LQ8IZX4 1826 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 AKR1B15C9JRZ8 316 aaPredicted RBP13.96□□□□□ -0.17
RFC5-201ENST00000392542 TEX33O43247 280 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 GTPBP6O43824 516 aaPredicted RBP13.96□□□□□ -0.17
RFC5-201ENST00000392542 GRM4Q14833 912 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 SLC4A8Q2Y0W8 1093 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.17
RFC5-201ENST00000392542 ARL6IP4Q66PJ3 421 aaKnown RBP13.96□□□□□ -0.17
RFC5-201ENST00000392542 SMYD4Q8IYR2 804 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms