RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 TNNT3P45378 269 aaPredicted RBP20.38■□□□□ 0.85
ERCC2-201ENST00000391941 PKN1Q16512 942 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 RASGRP2Q7LDG7 609 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 TRIML1Q8N9V2 468 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 SPATA20Q8TB22 786 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 UBAC1Q9BSL1 405 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 REXO2Q9Y3B8 237 aaKnown RBP20.38■□□□□ 0.85
ERCC2-201ENST00000391941 RRP15Q9Y3B9 282 aaKnown RBP20.38■□□□□ 0.85
ERCC2-201ENST00000391941 SPATA31A3Q5VYP0 1347 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 ERICH2A1L162 156 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 KRT9P35527 623 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 PTGDRQ13258 359 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 BRD3Q15059 726 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 CDKAL1Q5VV42 579 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 HDXQ7Z353 690 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 ZNF512BQ96KM6 892 aaPredicted RBP20.38■□□□□ 0.85
ERCC2-201ENST00000391941 ABHD10Q9NUJ1 306 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 TMOD3Q9NYL9 352 aa20.38■□□□□ 0.85
ERCC2-201ENST00000391941 ZNF185O15231 689 aa20.37■□□□□ 0.85
ERCC2-201ENST00000391941 ERCC3P19447 782 aa20.37■□□□□ 0.85
ERCC2-201ENST00000391941 KCTD19Q17RG1 926 aaPredicted RBP20.37■□□□□ 0.85
ERCC2-201ENST00000391941 PIGBQ92521 554 aa20.37■□□□□ 0.85
ERCC2-201ENST00000391941 ZBTB1Q9Y2K1 713 aa20.37■□□□□ 0.85
ERCC2-201ENST00000391941 PP2D1A8MPX8 630 aa20.37■□□□□ 0.85
ERCC2-201ENST00000391941 NKRFO15226 690 aaKnown RBP eCLIP20.37■□□□□ 0.851e-6■□□□□ 10.8
ERCC2-201ENST00000391941 ERCC5P28715 1186 aaPredicted RBP20.37■□□□□ 0.85
ERCC2-201ENST00000391941 ACTN2P35609 894 aa20.37■□□□□ 0.85
ERCC2-201ENST00000391941 PPARDQ03181 441 aa20.37■□□□□ 0.85
ERCC2-201ENST00000391941 ZNF579Q8NAF0 562 aaKnown RBP20.37■□□□□ 0.85
ERCC2-201ENST00000391941 LRP2BPQ9P2M1 347 aa20.37■□□□□ 0.85
ERCC2-201ENST00000391941 DUSP10Q9Y6W6 482 aa20.37■□□□□ 0.85
ERCC2-201ENST00000391941 CTAGE15A4D2H0 777 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 CTAGE8P0CG41 777 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 KLK7P49862 253 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 ALX1Q15699 326 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 IL17AQ16552 155 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 CTAGE6Q86UF2 777 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 CTAGE4Q8IX94 777 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 EXOC4Q96A65 974 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 NAPGQ99747 312 aaPredicted RBP20.36■□□□□ 0.85
ERCC2-201ENST00000391941 POLD4Q9HCU8 107 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 PMS1P54277 932 aaKnown RBP20.36■□□□□ 0.85
ERCC2-201ENST00000391941 MAP3K12Q12852 859 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 PIK3AP1Q6ZUJ8 805 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 RASGRP4Q8TDF6 673 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 SOS2Q07890 1332 aaPredicted RBP20.36■□□□□ 0.85
ERCC2-201ENST00000391941 SRCAPQ6ZRS2 3230 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 ADAMTSL3P82987 1691 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 ATP1A1P05023 1023 aaKnown RBP20.36■□□□□ 0.85
ERCC2-201ENST00000391941 UBXN1Q04323 297 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 KANK3Q6NY19 840 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 SLC4A9Q96Q91 983 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 MMS19Q96T76 1030 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 PLEKHG2Q9H7P9 1386 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 FAM204AQ9H8W3 233 aa20.36■□□□□ 0.85
ERCC2-201ENST00000391941 ARID4AP29374 1257 aaPredicted RBP20.35■□□□□ 0.85
ERCC2-201ENST00000391941 DYNLL1P63167 89 aaKnown RBP20.35■□□□□ 0.85
ERCC2-201ENST00000391941 MUM1L1Q5H9M0 696 aa20.35■□□□□ 0.85
ERCC2-201ENST00000391941 HOMEZQ8IX15 550 aa20.35■□□□□ 0.85
ERCC2-201ENST00000391941 CEP112Q8N8E3 955 aa20.35■□□□□ 0.85
ERCC2-201ENST00000391941 FILIP1LQ4L180 1135 aa20.35■□□□□ 0.85
ERCC2-201ENST00000391941 GIGYF2Q6Y7W6 1299 aaKnown RBP20.35■□□□□ 0.85
ERCC2-201ENST00000391941 SRLQ86TD4 932 aa20.35■□□□□ 0.85
ERCC2-201ENST00000391941 GOLGA5Q8TBA6 731 aa20.35■□□□□ 0.85
ERCC2-201ENST00000391941 MYBL2P10244 700 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 PPARAQ07869 468 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 SART3Q15020 963 aaKnown RBP20.34■□□□□ 0.85
ERCC2-201ENST00000391941 ENAHQ8N8S7 591 aaPredicted RBP20.34■□□□□ 0.85
ERCC2-201ENST00000391941 NELFBQ8WX92 580 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 PSMB7Q99436 277 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 KRT23Q9C075 422 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 RASSF4Q9H2L5 321 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 CNNM2Q9H8M5 875 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 JAG2Q9Y219 1238 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 UBR2Q8IWV8 1755 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 LEKR1Q6ZMV7 388 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 EHD4Q9H223 541 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 RAB21Q9UL25 225 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 MYO6Q9UM54 1294 aa20.34■□□□□ 0.85
ERCC2-201ENST00000391941 TTC26A0AVF1 554 aa20.33■□□□□ 0.85
ERCC2-201ENST00000391941 CYP7A1P22680 504 aa20.33■□□□□ 0.85
ERCC2-201ENST00000391941 COPB1P53618 953 aaKnown RBP20.33■□□□□ 0.85
ERCC2-201ENST00000391941 PUM3Q15397 648 aaKnown RBP20.33■□□□□ 0.85
ERCC2-201ENST00000391941 TTC19Q6DKK2 380 aaPredicted RBP20.33■□□□□ 0.85
ERCC2-201ENST00000391941 DRC1Q96MC2 740 aa20.33■□□□□ 0.85
ERCC2-201ENST00000391941 CEP131Q9UPN4 1083 aa20.33■□□□□ 0.85
ERCC2-201ENST00000391941 PARP4Q9UKK3 1724 aaKnown RBP20.33■□□□□ 0.84
ERCC2-201ENST00000391941 RCCD1A6NED2 376 aa20.33■□□□□ 0.84
ERCC2-201ENST00000391941 KCNJ18B7U540 433 aa20.33■□□□□ 0.84
ERCC2-201ENST00000391941 KRT2P35908 639 aa20.33■□□□□ 0.84
ERCC2-201ENST00000391941 KCNJ12Q14500 433 aa20.33■□□□□ 0.84
ERCC2-201ENST00000391941 FAM47AQ5JRC9 791 aa20.33■□□□□ 0.84
ERCC2-201ENST00000391941 MSANTD4Q8NCY6 345 aa20.33■□□□□ 0.84
ERCC2-201ENST00000391941 CYP27A1Q02318 531 aa20.32■□□□□ 0.84
ERCC2-201ENST00000391941 NKX1-1Q15270 411 aaPredicted RBP20.32■□□□□ 0.84
ERCC2-201ENST00000391941 SH3RF1Q7Z6J0 888 aa20.32■□□□□ 0.84
ERCC2-201ENST00000391941 SMCR8Q8TEV9 937 aaPredicted RBP20.32■□□□□ 0.84
ERCC2-201ENST00000391941 AATFQ9NY61 560 aaKnown RBP eCLIP20.32■□□□□ 0.84
ERCC2-201ENST00000391941 SMARCAL1Q9NZC9 954 aa20.32■□□□□ 0.84
ERCC2-201ENST00000391941 UQCRFS1P1P0C7P4 283 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms