RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 TRIM13O60858 407 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 MFAP1P55081 439 aaKnown RBP3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 DLG4P78352 724 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 SSPNQ14714 243 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 MAP3K11Q16584 847 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 DNAJC14Q6Y2X3 702 aaPredicted RBP3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 IRF2BP1Q8IU81 584 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 SLFN12Q8IYM2 578 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 USHBP1Q8N6Y0 703 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 PDZD8Q8NEN9 1154 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 BAHD1Q8TBE0 780 aaPredicted RBP3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 COX4I2Q96KJ9 171 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 DUSP9Q99956 384 aaKnown RBP3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 SGPP1Q9BX95 441 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 EPB41L4BQ9H329 900 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 PICK1Q9NRD5 415 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 TTF2Q9UNY4 1162 aaKnown RBP3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 SPG7Q9UQ90 795 aa3.59□□□□□ -1.83
SNORA40.19-201ENST00000390846 F6X3S4 739 aa3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 PRPF40AO75400 957 aaKnown RBP3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 F13A1P00488 732 aa3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 HNRNPUQ00839 825 aaKnown RBP eCLIP3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 KIR3DS1Q14943 382 aa3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 CCDC85BQ15834 202 aaPredicted RBP3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 TSNAXIP1Q2TAA8 658 aa3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 FBXO33Q7Z6M2 555 aa3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 NLRX1Q86UT6 975 aa3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 ZSCAN18Q8TBC5 510 aaPredicted RBP3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 CYB5D2Q8WUJ1 264 aa3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 XYLT2Q9H1B5 865 aa3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 MBD1Q9UIS9 605 aaPredicted RBP3.58□□□□□ -1.84
SNORA40.19-201ENST00000390846 NFIBO00712 420 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 PEX10O60683 326 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 UBOX5O94941 541 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 RBM25P49756 843 aaKnown RBP3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 DAB2P98082 770 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 NFKB2Q00653 900 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 EGR3Q06889 387 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 ZNF746Q6NUN9 644 aaPredicted RBP3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 CCDC84Q86UT8 332 aaPredicted RBP3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 ZSCAN29Q8IWY8 852 aaPredicted RBP3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 TMEFF1Q8IYR6 380 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 MARCH10Q8NA82 808 aaPredicted RBP3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 FBXO27Q8NI29 283 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 RNF141Q8WVD5 230 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 KCNN1Q92952 543 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 INTS4Q96HW7 963 aaKnown RBP3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 FRMD6Q96NE9 622 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 SLC26A8Q96RN1 970 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 IRF2BPLQ9H1B7 796 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 KCNQ5Q9NR82 932 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 SHROOM4Q9ULL8 1493 aa3.57□□□□□ -1.84
SNORA40.19-201ENST00000390846 TEX51A0A1B0GUA7 166 aa3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 PF4P02776 101 aa3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 TMEM253P0C7T8 217 aa3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 EIF4BP23588 611 aaKnown RBP3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 ST13P50502 369 aaKnown RBP3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 CAMK2GQ13555 558 aaPredicted RBP3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 DACT3Q96B18 629 aaPredicted RBP3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 KREMEN1Q96MU8 473 aa3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 FAM161BQ96MY7 647 aa3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 NOC4LQ9BVI4 516 aaKnown RBP3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 HDAC8Q9BY41 377 aa3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 PARD6AQ9NPB6 346 aa3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 DUSP13Q9UII6 198 aa3.56□□□□□ -1.84
SNORA40.19-201ENST00000390846 IRS4O14654 1257 aaPredicted RBP3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 CYP7A1P22680 504 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 ETV3P41162 512 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 EPHB3P54753 998 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 LMNB2Q03252 620 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 SNW1Q13573 536 aaKnown RBP3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 BBS9Q3SYG4 887 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 LDLRAD1Q5T700 205 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 TMCO4Q5TGY1 634 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 ZPBP2Q6X784 338 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 LILRA2Q8N149 483 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 TP53I13Q8NBR0 393 aaPredicted RBP3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 TMEM52Q8NDY8 209 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 GATAD2BQ8WXI9 593 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 JARID2Q92833 1246 aaPredicted RBP3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 PLCD4Q9BRC7 762 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 MIR1-1HGQ9H1L0 117 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 CNTD2Q9H8S5 307 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 REV1Q9UBZ9 1251 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 PARP2Q9UGN5 583 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 MINPP1Q9UNW1 487 aa3.55□□□□□ -1.84
SNORA40.19-201ENST00000390846 ANKRD33BA6NCL7 494 aa3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 SLC22A31A6NKX4 558 aa3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 GREM1O60565 184 aa3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 HTR3BO95264 441 aa3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 PLCG1P19174 1290 aa3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 YBX1P67809 324 aaKnown RBP3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 KCNA1Q09470 495 aa3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 SKOR2Q2VWA4 1001 aaPredicted RBP3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 ZNF605Q86T29 641 aa3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 CCDC120Q96HB5 630 aa3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 HHIPL1Q96JK4 782 aa3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 CWC22Q9HCG8 908 aaKnown RBP3.54□□□□□ -1.84
SNORA40.19-201ENST00000390846 PLA2G2DQ9UNK4 145 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms