RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 PRR20CP86479 221 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 PRR20DP86480 221 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 PRR20BP86481 221 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 PRR20AP86496 221 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 TMPRSS15P98073 1019 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 MLLT1Q03111 559 aaPredicted RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 PICALMQ13492 652 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 GTF2H3Q13889 308 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 INPP5AQ14642 412 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 SEPT7Q16181 437 aaKnown RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 TMEM95Q3KNT9 176 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 GRAMD1BQ3KR37 738 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 RGL3Q3MIN7 710 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 CFAP100Q494V2 611 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 MINDY4Q4G0A6 757 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 C10orf62Q5T681 223 aaPredicted RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 IFFO2Q5TF58 517 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 HEATR6Q6AI08 1181 aaKnown RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 LHFPL2Q6ZUX7 228 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 MAMDC2Q7Z304 686 aaPredicted RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 BRAPQ7Z569 592 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 RAB44Q7Z6P3 723 aaPredicted RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 ZNF227Q86WZ6 799 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 MCATQ8IVS2 390 aaKnown RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 SLFN12Q8IYM2 578 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 SPICE1Q8N0Z3 855 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 LRRN4CLQ8ND94 238 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 PJA1Q8NG27 643 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 PI4K2BQ8TCG2 481 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 TTC9Q92623 222 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 PTPRN2Q92932 1015 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 E2F7Q96AV8 911 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 GMCL1Q96IK5 515 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 ZNF512BQ96KM6 892 aaPredicted RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 MAGEB10Q96LZ2 347 aaPredicted RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 CCDC140Q96MF4 163 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 HAUS7Q99871 368 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 CORO1BQ9BR76 489 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 SARGQ9BW04 601 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 RHOBTB2Q9BYZ6 727 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 TRIM8Q9BZR9 551 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 SLC13A1Q9BZW2 595 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 GBP3Q9H0R5 595 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 NUCKS1Q9H1E3 243 aaKnown RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 SLC52A2Q9HAB3 445 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 OSGEPQ9NPF4 335 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 DNAJB12Q9NXW2 375 aaKnown RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 SUCOQ9UBS9 1254 aaKnown RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 KLHL3Q9UH77 587 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 NDOR1Q9UHB4 597 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 USP25Q9UHP3 1055 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 ATXN7L1Q9ULK2 861 aaPredicted RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 PNMA8BQ9ULN7 279 aaPredicted RBP2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 PHF24Q9UPV7 400 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 ANKRD6Q9Y2G4 727 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 TNKSO95271 1327 aa2.13□□□□□ -2.07
TRAJ39-201ENST00000390498 SENP3-EIF4A1A0A087X0R7 540 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 TCRBV16S1A1N1A0A5B0 115 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 FAM86C2PA6NEL3 165 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 VSTM5A8MXK1 200 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 H3BRJ5 948 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 NOP56O00567 594 aaKnown RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 NEMP1O14524 444 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 ERC2O15083 957 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 TBX3O15119 743 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 NPHP1O15259 732 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 MAFGO15525 162 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 PRPF3O43395 683 aaKnown RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 KPNA6O60684 536 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 SIN3BO75182 1162 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 PPM1BO75688 479 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 SNUPNO95149 360 aaKnown RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 TP53P04637 393 aaPredicted RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 EPHX1P07099 455 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 HSP90AA1P07900 732 aaKnown RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 CT47B1P0C2W7 299 aaPredicted RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 JMJD7P0C870 316 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 NAT1P18440 290 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 VCAM1P19320 739 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 CD33P20138 364 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 CCND1P24385 295 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 GRK4P32298 578 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 CYP2C19P33261 490 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 KRT85P78386 507 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 GSTM4Q03013 218 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 RING1Q06587 406 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 C19orf57Q0VDD7 668 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 GRB10Q13322 594 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 GBX1Q14549 363 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 SART3Q15020 963 aaKnown RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 SETDB1Q15047 1291 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 POU4F3Q15319 338 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 KIF4BQ2VIQ3 1234 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 FOXD4L6Q3SYB3 417 aaPredicted RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 ANKRD39Q53RE8 183 aa2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 INO80DQ53TQ3 878 aaPredicted RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 HP1BP3Q5SSJ5 553 aaPredicted RBP2.12□□□□□ -2.07
TRAJ39-201ENST00000390498 TMEM240Q5SV17 173 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms