RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 ZSWIM6Q9HCJ5 1215 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 ADCY9O60503 1353 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 ASPRV1Q53RT3 343 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 ANTXR1Q9H6X2 564 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 PALD1Q9ULE6 856 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 MAPK8IP1Q9UQF2 711 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 TRPC6Q9Y210 931 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 KCNQ2O43526 872 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 CNGA4Q8IV77 575 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 SPICE1Q8N0Z3 855 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 DIP2CQ9Y2E4 1556 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 ZNF521Q96K83 1311 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 GCNT3O95395 438 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 NEK8Q86SG6 692 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 NOSTRINQ8IVI9 506 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 MRPL44Q9H9J2 332 aaKnown RBP11.48□□□□□ -0.57
PKP4-201ENST00000389757 PI4KBQ9UBF8 816 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 IKBKGQ9Y6K9 419 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 CLTCQ00610 1675 aaKnown RBP11.48□□□□□ -0.57
PKP4-201ENST00000389757 EXOC3O60645 756 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 ZNF202O95125 648 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 FOSP01100 380 aaPredicted RBP11.48□□□□□ -0.57
PKP4-201ENST00000389757 RAD51AP2Q09MP3 1159 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 PAK1Q13153 545 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 MYSM1Q5VVJ2 828 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 KRT26Q7Z3Y9 468 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 SLFN12Q8IYM2 578 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 MLKLQ8NB16 471 aa11.48□□□□□ -0.57
PKP4-201ENST00000389757 BCCIPQ9P287 314 aaKnown RBP eCLIP11.48□□□□□ -0.57
PKP4-201ENST00000389757 GDF11O95390 407 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 IREB2P48200 963 aaKnown RBP11.47□□□□□ -0.57
PKP4-201ENST00000389757 VWA3BQ502W6 1294 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 PI16Q6UXB8 463 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 CCDC50Q8IVM0 306 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 GPKOWQ92917 476 aaPredicted RBP eCLIP11.47□□□□□ -0.57
PKP4-201ENST00000389757 CDC42BPBQ9Y5S2 1711 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 EN1Q05925 392 aaPredicted RBP11.47□□□□□ -0.57
PKP4-201ENST00000389757 DIXDC1Q155Q3 683 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 TBC1D9BQ66K14 1250 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 DPP9Q86TI2 863 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 DEPTORQ8TB45 409 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 MAP4K1Q92918 833 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 RASAL2Q9UJF2 1139 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 PLCB3Q01970 1234 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 INF2Q27J81 1249 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 TSNARE1Q96NA8 513 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 CLSTN2Q9H4D0 955 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 ZSWIM4Q9H7M6 989 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 M0R2C6 588 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 RASGRF1Q13972 1273 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 LCORLQ8N3X6 602 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 IWS1Q96ST2 819 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 TBC1D7Q9P0N9 293 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 PCDHA12Q9UN75 941 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 CEP152O94986 1710 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 SYNRGQ9UMZ2 1314 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 CCDC66A2RUB6 948 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 PLA2G4DQ86XP0 818 aa11.47□□□□□ -0.57
PKP4-201ENST00000389757 CAMSAP1Q5T5Y3 1602 aa11.46□□□□□ -0.57
PKP4-201ENST00000389757 METTL13Q8N6R0 699 aa11.46□□□□□ -0.57
PKP4-201ENST00000389757 GPR101Q96P66 508 aaPredicted RBP11.46□□□□□ -0.57
PKP4-201ENST00000389757 TEKT3Q9BXF9 490 aa11.46□□□□□ -0.57
PKP4-201ENST00000389757 SSX2IPQ9Y2D8 614 aa11.46□□□□□ -0.57
PKP4-201ENST00000389757 ATP6V0A2Q9Y487 856 aa11.46□□□□□ -0.57
PKP4-201ENST00000389757 MECOMQ03112 1051 aa11.46□□□□□ -0.57
PKP4-201ENST00000389757 POLA2Q14181 598 aa11.46□□□□□ -0.57
PKP4-201ENST00000389757 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.46□□□□□ -0.57
PKP4-201ENST00000389757 BBXQ8WY36 941 aaPredicted RBP11.46□□□□□ -0.57
PKP4-201ENST00000389757 TRPM1Q7Z4N2 1603 aa11.46□□□□□ -0.58
PKP4-201ENST00000389757 DTNBO60941 627 aa11.46□□□□□ -0.58
PKP4-201ENST00000389757 POSTNQ15063 836 aa11.46□□□□□ -0.58
PKP4-201ENST00000389757 NOX5Q96PH1 765 aa11.46□□□□□ -0.58
PKP4-201ENST00000389757 VPS16Q9H269 839 aa11.46□□□□□ -0.58
PKP4-201ENST00000389757 DNAI1Q9UI46 699 aa11.46□□□□□ -0.58
PKP4-201ENST00000389757 MYO3BQ8WXR4 1341 aa11.46□□□□□ -0.58
PKP4-201ENST00000389757 MAP2K1Q02750 393 aaPredicted RBP11.46□□□□□ -0.58
PKP4-201ENST00000389757 PAXBP1Q9Y5B6 917 aa11.46□□□□□ -0.58
PKP4-201ENST00000389757 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.46□□□□□ -0.581e-6■■■□□ 18.3
PKP4-201ENST00000389757 CTAGE15A4D2H0 777 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 OR52Z1P0C646 297 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 CTAGE8P0CG41 777 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 GSTA5Q7RTV2 222 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 CTAGE6Q86UF2 777 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 ZBTB8OSQ8IWT0 167 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 CTAGE4Q8IX94 777 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 NELFCDQ8IXH7 590 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 LSG1Q9H089 658 aaKnown RBP11.45□□□□□ -0.58
PKP4-201ENST00000389757 DDX25Q9UHL0 483 aaKnown RBP11.45□□□□□ -0.58
PKP4-201ENST00000389757 TPCN1Q9ULQ1 816 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 PRKAB2O43741 272 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 TNFAIP3P21580 790 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 SNX16P57768 344 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 FOXP4Q8IVH2 680 aaPredicted RBP11.45□□□□□ -0.58
PKP4-201ENST00000389757 CDHR2Q9BYE9 1310 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 IGKV5-2P06315 115 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 GOLGA1Q92805 767 aa11.45□□□□□ -0.58
PKP4-201ENST00000389757 BMP3P12645 472 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms