RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 FOXN1O15353 648 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 MYL1P05976 194 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 GUCY2CP25092 1073 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 GUCY1A2P33402 732 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 FUT2Q10981 343 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 SPECC1Q5M775 1068 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 ZNF662Q6ZS27 426 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 TOGARAM2Q6ZUX3 1019 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 PDILTQ8N807 584 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 ANKRD20A12PQ8NF67 263 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 MED15Q96RN5 788 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 ARMT1Q9H993 441 aa12.9□□□□□ -0.34
CCDC149-202ENST00000389609 MAP2K7O14733 419 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 ERLIN1O75477 346 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 SASH3O75995 380 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 ATP2C1P98194 919 aaPredicted RBP12.89□□□□□ -0.35
CCDC149-202ENST00000389609 GOLGA8FQ08AF8 430 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 GOLGA8DPQ0D2H9 430 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 WHAMMP3Q1A5X7 153 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 CCDC152Q4G0S7 254 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 ARL6IP4Q66PJ3 421 aaKnown RBP12.89□□□□□ -0.35
CCDC149-202ENST00000389609 IGSF22Q8N9C0 903 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 NCAPGQ9BPX3 1015 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 ZCCHC17Q9NP64 241 aaKnown RBP12.89□□□□□ -0.35
CCDC149-202ENST00000389609 RWDD2AQ9UIY3 292 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 LOC102724159A0A0B4J2E5 919 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 SNAP23O00161 211 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 PIP4K2BP78356 416 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 PWP2Q15269 919 aaKnown RBP12.89□□□□□ -0.35
CCDC149-202ENST00000389609 PTPN21Q16825 1174 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 CATIPQ7Z7H3 387 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
CCDC149-202ENST00000389609 HELBQ8NG08 1087 aaPredicted RBP12.89□□□□□ -0.35
CCDC149-202ENST00000389609 CCDC12Q8WUD4 166 aaPredicted RBP12.89□□□□□ -0.35
CCDC149-202ENST00000389609 TNFRSF25Q93038 417 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 EXOC4Q96A65 974 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 PAGE5Q96GU1 130 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 SAMSN1Q9NSI8 373 aaKnown RBP12.89□□□□□ -0.35
CCDC149-202ENST00000389609 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
CCDC149-202ENST00000389609 KCNJ14Q9UNX9 436 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 TACC3Q9Y6A5 838 aa12.89□□□□□ -0.35
CCDC149-202ENST00000389609 SEC31AO94979 1220 aaKnown RBP12.88□□□□□ -0.35
CCDC149-202ENST00000389609 IGHMBP2P38935 993 aaKnown RBP12.88□□□□□ -0.35
CCDC149-202ENST00000389609 CHMP4BP1P59074 171 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 SMC1AQ14683 1233 aaKnown RBP12.88□□□□□ -0.35
CCDC149-202ENST00000389609 PKN1Q16512 942 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 LCORLQ8N3X6 602 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 FUT8Q9BYC5 575 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 CABP5Q9NP86 173 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 GNL3LQ9NVN8 582 aaKnown RBP12.88□□□□□ -0.35
CCDC149-202ENST00000389609 TNKSO95271 1327 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 PPP1R3GB7ZBB8 358 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 GTPBP6O43824 516 aaPredicted RBP12.88□□□□□ -0.35
CCDC149-202ENST00000389609 ADKP55263 362 aaKnown RBP12.88□□□□□ -0.35
CCDC149-202ENST00000389609 GRIN1Q05586 938 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 NR5A1Q13285 461 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 HSP90AA4PQ58FG1 418 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 IQCA1Q86XH1 822 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 GOLGA6L1Q8N7Z2 621 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 DHX58Q96C10 678 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 MYCBPQ99417 103 aaPredicted RBP12.88□□□□□ -0.35
CCDC149-202ENST00000389609 PARD6BQ9BYG5 372 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 TOMM22Q9NS69 142 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 MYH6P13533 1939 aa12.88□□□□□ -0.35
CCDC149-202ENST00000389609 COL14A1Q05707 1796 aaKnown RBP12.87□□□□□ -0.35
CCDC149-202ENST00000389609 CTAGE9A4FU28 777 aa12.87□□□□□ -0.35
CCDC149-202ENST00000389609 ORC4O43929 436 aa12.87□□□□□ -0.35
CCDC149-202ENST00000389609 EIF3JO75822 258 aaKnown RBP12.87□□□□□ -0.35
CCDC149-202ENST00000389609 MCM3P25205 808 aa12.87□□□□□ -0.35
CCDC149-202ENST00000389609 HOXA7P31268 230 aaPredicted RBP12.87□□□□□ -0.35
CCDC149-202ENST00000389609 E2F4Q16254 413 aa12.87□□□□□ -0.35
CCDC149-202ENST00000389609 RRP12Q5JTH9 1297 aaKnown RBP12.87□□□□□ -0.35
CCDC149-202ENST00000389609 CYP26C1Q6V0L0 522 aa12.87□□□□□ -0.35
CCDC149-202ENST00000389609 ZSCAN10Q96SZ4 725 aaPredicted RBP12.87□□□□□ -0.35
CCDC149-202ENST00000389609 PHLPP1O60346 1717 aa12.87□□□□□ -0.35
CCDC149-202ENST00000389609 EIF5P55010 431 aaKnown RBP12.86□□□□□ -0.35
CCDC149-202ENST00000389609 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
CCDC149-202ENST00000389609 IQCDQ96DY2 449 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 RPGRIP1Q96KN7 1286 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 ZKSCAN3Q9BRR0 538 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 MRPL44Q9H9J2 332 aaKnown RBP12.86□□□□□ -0.35
CCDC149-202ENST00000389609 SH3GLB2Q9NR46 395 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 A0A1W2PQC6 194 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 CALML3P27482 149 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 ACTN2P35609 894 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 LONP1P36776 959 aaKnown RBP12.86□□□□□ -0.35
CCDC149-202ENST00000389609 PPP1R2P41236 205 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 RBL2Q08999 1139 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 UBE4AQ14139 1066 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 ZNF827Q17R98 1081 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 LONRF2Q1L5Z9 754 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 TTC38Q5R3I4 469 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 RAD9BQ6WBX8 426 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 TMTC3Q6ZXV5 915 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 HDXQ7Z353 690 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 TRMT44Q8IYL2 757 aaKnown RBP12.86□□□□□ -0.35
CCDC149-202ENST00000389609 CCDC82Q8N4S0 544 aa12.86□□□□□ -0.35
CCDC149-202ENST00000389609 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
CCDC149-202ENST00000389609 ACBD3Q9H3P7 528 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms