RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 FANCLQ9NW38 375 aa7.85□□□□□ -1.15
RNU6-40P-201ENST00000384254 TPX2Q9ULW0 747 aaKnown RBP7.85□□□□□ -1.15
RNU6-40P-201ENST00000384254 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
RNU6-40P-201ENST00000384254 SLC10A6Q3KNW5 377 aa7.84□□□□□ -1.15
RNU6-40P-201ENST00000384254 ADAT2Q7Z6V5 191 aaKnown RBP7.84□□□□□ -1.15
RNU6-40P-201ENST00000384254 PPFIBP1Q86W92 1011 aa7.84□□□□□ -1.15
RNU6-40P-201ENST00000384254 DZIP1LQ8IYY4 767 aaKnown RBP7.84□□□□□ -1.15
RNU6-40P-201ENST00000384254 ZNF512BQ96KM6 892 aaPredicted RBP7.84□□□□□ -1.15
RNU6-40P-201ENST00000384254 KREMEN1Q96MU8 473 aa7.84□□□□□ -1.15
RNU6-40P-201ENST00000384254 ASPNQ9BXN1 380 aa7.84□□□□□ -1.15
RNU6-40P-201ENST00000384254 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.84□□□□□ -1.15
RNU6-40P-201ENST00000384254 DIAPH1O60610 1272 aaKnown RBP7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 HSP90B1P14625 803 aaKnown RBP7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 CDK5R2Q13319 367 aa7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 BEND4Q6ZU67 534 aa7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 CDH24Q86UP0 819 aa7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 TOP6BLQ8N6T0 577 aa7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 ZSWIM2Q8NEG5 633 aa7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 DNAJB8Q8NHS0 232 aa7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 RNF141Q8WVD5 230 aa7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 MEGF10Q96KG7 1140 aa7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 IPO9Q96P70 1041 aaKnown RBP7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 SPATA9Q9BWV2 254 aa7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 SUGT1Q9Y2Z0 365 aa7.83□□□□□ -1.16
RNU6-40P-201ENST00000384254 ESYT3A0FGR9 886 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 C9IYK1 514 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 PPM1BO75688 479 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 SLITRK5O94991 958 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 EPHX1P07099 455 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 AXDND1Q5T1B0 1012 aaPredicted RBP7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 RNF187Q5TA31 235 aaPredicted RBP7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 NBPF12Q5TAG4 269 aaPredicted RBP7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 CRACR2BQ8N4Y2 399 aaPredicted RBP7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 PPP1R13LQ8WUF5 828 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 SGSM3Q96HU1 749 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 COX4I2Q96KJ9 171 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 SLC26A8Q96RN1 970 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 FBXL21Q9UKT6 434 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 PCDHB12Q9Y5F1 795 aa7.82□□□□□ -1.16
RNU6-40P-201ENST00000384254 NOP56O00567 594 aaKnown RBP7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 ITGA4P13612 1032 aa7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 ZC3H12BQ5HYM0 836 aaKnown RBP7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 DCAF15Q66K64 600 aa7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 CLEC10AQ8IUN9 316 aa7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 C7orf61Q8IZ16 206 aa7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 ARMC10Q8N2F6 343 aa7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 TMEM260Q9NX78 707 aa7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 WHRNQ9P202 907 aa7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 PTCH2Q9Y6C5 1203 aa7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 SBNO2Q9Y2G9 1366 aa7.81□□□□□ -1.16
RNU6-40P-201ENST00000384254 KRBA1A5PL33 1030 aa7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 DYNC1LI2O43237 492 aaPredicted RBP7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 AUHQ13825 339 aaKnown RBP7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 HSP90AA2PQ14568 343 aaPredicted RBP7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 LONRF2Q1L5Z9 754 aa7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 PLEKHG4Q58EX7 1191 aa7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 NOL9Q5SY16 702 aaKnown RBP7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 C16orf86Q6ZW13 317 aa7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 SYNPOQ8N3V7 929 aa7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 LRRN4CLQ8ND94 238 aa7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 FGD4Q96M96 766 aa7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 PRDM5Q9NQX1 630 aaPredicted RBP7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 KCNH3Q9ULD8 1083 aa7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 LEMD3Q9Y2U8 911 aa7.8□□□□□ -1.16
RNU6-40P-201ENST00000384254 PPP1R12AO14974 1030 aaPredicted RBP7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 FAM87AP0C7U9 286 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 CD247P20963 164 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 TCEA2Q15560 299 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 ANKRD39Q53RE8 183 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 TMEM67Q5HYA8 995 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 POMZP3Q6PJE2 187 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 SEZ6L2Q6UXD5 910 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 ZNF662Q6ZS27 426 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 RIN3Q8TB24 985 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 FBXL18Q96ME1 805 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 PSMG3-AS1Q96PY0 264 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 CDC6Q99741 560 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 DUSP23Q9BVJ7 150 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 KLHL25Q9H0H3 589 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 ASCC2Q9H1I8 757 aaPredicted RBP7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 KANSL2Q9H9L4 492 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 GTF2IRD1Q9UHL9 959 aa7.79□□□□□ -1.16
RNU6-40P-201ENST00000384254 CBFA2T2O43439 604 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 SQSTM1Q13501 440 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 NBPF9Q3BBW0 867 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 SFRP5Q5T4F7 317 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 JMYQ8N9B5 988 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 ZBTB38Q8NAP3 1195 aaPredicted RBP7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 TBC1D32Q96NH3 1257 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 FEZ1Q99689 392 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 FAM83CQ9BQN1 747 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 TMX1Q9H3N1 280 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 C1GALT1Q9NS00 363 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 ZNF451Q9Y4E5 1061 aa7.78□□□□□ -1.16
RNU6-40P-201ENST00000384254 TRAV20A0A0B4J274 112 aa7.77□□□□□ -1.17
RNU6-40P-201ENST00000384254 CCDC163A0A0D9SF12 145 aa7.77□□□□□ -1.17
RNU6-40P-201ENST00000384254 PPM1GO15355 546 aaPredicted RBP7.77□□□□□ -1.17
RNU6-40P-201ENST00000384254 FAM153BP0C7A2 387 aa7.77□□□□□ -1.17
RNU6-40P-201ENST00000384254 KIR3DL1P43629 444 aa7.77□□□□□ -1.17
RNU6-40P-201ENST00000384254 CYP27A1Q02318 531 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms