RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 KRT23Q9C075 422 aa23.59■■□□□ 1.37
CDPF1-202ENST00000381037 TLR2O60603 784 aa23.58■■□□□ 1.36
CDPF1-202ENST00000381037 CYP2C8P10632 490 aa23.58■■□□□ 1.36
CDPF1-202ENST00000381037 RCSD1Q6JBY9 416 aa23.58■■□□□ 1.36
CDPF1-202ENST00000381037 LPAR1Q92633 364 aa23.58■■□□□ 1.36
CDPF1-202ENST00000381037 ZFYVE28Q9HCC9 887 aa23.58■■□□□ 1.36
CDPF1-202ENST00000381037 EPB41L2O43491 1005 aaKnown RBP23.57■■□□□ 1.36
CDPF1-202ENST00000381037 REC8O95072 547 aa23.57■■□□□ 1.36
CDPF1-202ENST00000381037 ASCC2Q9H1I8 757 aaPredicted RBP23.57■■□□□ 1.36
CDPF1-202ENST00000381037 PABPC4Q13310 644 aaKnown RBP eCLIP23.56■■□□□ 1.36
CDPF1-202ENST00000381037 PPP4R3BQ5MIZ7 849 aa23.56■■□□□ 1.36
CDPF1-202ENST00000381037 KCNB2Q92953 911 aa23.56■■□□□ 1.36
CDPF1-202ENST00000381037 PARK7Q99497 189 aaKnown RBP23.56■■□□□ 1.36
CDPF1-202ENST00000381037 STX8Q9UNK0 236 aa23.56■■□□□ 1.36
CDPF1-202ENST00000381037 F5H6K3 240 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 LBX1P52954 281 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 KLRC3Q07444 240 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 TSGA10IPQ3SY00 556 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 C17orf99Q6UX52 265 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 CATSPERGQ6ZRH7 1159 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 RASEFQ8IZ41 740 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 TTC14Q96N46 770 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 GPR25O00155 361 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 COL9A3Q14050 684 aaPredicted RBP23.55■■□□□ 1.36
CDPF1-202ENST00000381037 CYB5R4Q7L1T6 521 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 SPICE1Q8N0Z3 855 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 GMCL1P1Q8NEA9 526 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 RPAP3Q9H6T3 665 aaPredicted RBP23.55■■□□□ 1.36
CDPF1-202ENST00000381037 GOPCQ9HD26 462 aa23.55■■□□□ 1.36
CDPF1-202ENST00000381037 USP17L15C9J2P7 530 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 USP17L13C9JLJ4 530 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 USP17L11C9JVI0 530 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 USP17L18D6R9N7 530 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 USP17L22D6RA61 530 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 USP17L17D6RBQ6 530 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 USP17L19D6RCP7 530 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 USP17L20D6RJB6 530 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 HSPA4P34932 840 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 USP17L24Q0WX57 530 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 TRDNQ13061 729 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 POTEEQ6S8J3 1075 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 LRRC47Q8N1G4 583 aaKnown RBP23.54■■□□□ 1.36
CDPF1-202ENST00000381037 NCOA7Q8NI08 942 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 ANKS1AQ92625 1134 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 P2RX7Q99572 595 aaKnown RBP23.54■■□□□ 1.36
CDPF1-202ENST00000381037 ZKSCAN3Q9BRR0 538 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 USP26Q9BXU7 913 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 PNMA3Q9UL41 463 aa23.54■■□□□ 1.36
CDPF1-202ENST00000381037 WDR46O15213 610 aaKnown RBP23.53■■□□□ 1.36
CDPF1-202ENST00000381037 NDUFB10O96000 172 aa23.53■■□□□ 1.36
CDPF1-202ENST00000381037 RNF20Q5VTR2 975 aa23.53■■□□□ 1.36
CDPF1-202ENST00000381037 IQCA1Q86XH1 822 aa23.53■■□□□ 1.36
CDPF1-202ENST00000381037 DGKHQ86XP1 1220 aa23.53■■□□□ 1.36
CDPF1-202ENST00000381037 MB21D2Q8IYB1 491 aaPredicted RBP23.53■■□□□ 1.36
CDPF1-202ENST00000381037 ZSCAN10Q96SZ4 725 aaPredicted RBP23.53■■□□□ 1.36
CDPF1-202ENST00000381037 TMEM47Q9BQJ4 181 aa23.53■■□□□ 1.36
CDPF1-202ENST00000381037 BCRP11274 1271 aa23.52■■□□□ 1.36
CDPF1-202ENST00000381037 OSBPP22059 807 aa23.52■■□□□ 1.36
CDPF1-202ENST00000381037 MYH4Q9Y623 1939 aa23.52■■□□□ 1.36
CDPF1-202ENST00000381037 TOP1P11387 765 aaKnown RBP23.51■■□□□ 1.35
CDPF1-202ENST00000381037 ANTXR2P58335 489 aa23.51■■□□□ 1.35
CDPF1-202ENST00000381037 ENAHQ8N8S7 591 aaPredicted RBP23.51■■□□□ 1.35
CDPF1-202ENST00000381037 ZNF296Q8WUU4 475 aaPredicted RBP23.51■■□□□ 1.35
CDPF1-202ENST00000381037 HERVK_113P62684 666 aa23.51■■□□□ 1.35
CDPF1-202ENST00000381037 IRX3P78415 501 aaPredicted RBP23.51■■□□□ 1.35
CDPF1-202ENST00000381037 SEC23AQ15436 765 aa23.51■■□□□ 1.35
CDPF1-202ENST00000381037 CCDC178Q5BJE1 867 aa23.51■■□□□ 1.35
CDPF1-202ENST00000381037 RALYLQ86SE5 291 aaKnown RBP23.51■■□□□ 1.35
CDPF1-202ENST00000381037 PRDM10Q9NQV6 1147 aa23.51■■□□□ 1.35
CDPF1-202ENST00000381037 CPA4Q9UI42 421 aa23.51■■□□□ 1.35
CDPF1-202ENST00000381037 C8orf34Q49A92 452 aa23.5■■□□□ 1.35
CDPF1-202ENST00000381037 LBX2Q6XYB7 198 aa23.5■■□□□ 1.35
CDPF1-202ENST00000381037 SMCR8Q8TEV9 937 aaPredicted RBP23.5■■□□□ 1.35
CDPF1-202ENST00000381037 GMCL1Q96IK5 515 aa23.5■■□□□ 1.35
CDPF1-202ENST00000381037 NUP88Q99567 741 aaPredicted RBP23.5■■□□□ 1.35
CDPF1-202ENST00000381037 TNKSO95271 1327 aa23.5■■□□□ 1.35
CDPF1-202ENST00000381037 GCLCP48506 637 aaPredicted RBP23.49■■□□□ 1.35
CDPF1-202ENST00000381037 COG2Q14746 738 aa23.49■■□□□ 1.35
CDPF1-202ENST00000381037 ADCK5Q3MIX3 580 aa23.49■■□□□ 1.35
CDPF1-202ENST00000381037 FAM83BQ5T0W9 1011 aa23.49■■□□□ 1.35
CDPF1-202ENST00000381037 SLFN13Q68D06 897 aa23.49■■□□□ 1.35
CDPF1-202ENST00000381037 RLFQ13129 1914 aa23.49■■□□□ 1.35
CDPF1-202ENST00000381037 SEC24BO95487 1268 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 ZKSCAN1P17029 563 aaPredicted RBP23.48■■□□□ 1.35
CDPF1-202ENST00000381037 SP3Q02447 781 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 UBAC1Q9BSL1 405 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 TANGO6Q9C0B7 1094 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 RBPJLQ9UBG7 517 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 SNX14Q9Y5W7 946 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 SPDYE16A6NNV3 312 aaPredicted RBP23.48■■□□□ 1.35
CDPF1-202ENST00000381037 FKTNO75072 461 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 CAP1Q01518 475 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 CHST3Q7LGC8 479 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 IGDCC4Q8TDY8 1250 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 FBXO28Q9NVF7 368 aa23.48■■□□□ 1.35
CDPF1-202ENST00000381037 RAD21O60216 631 aa23.47■■□□□ 1.35
CDPF1-202ENST00000381037 SNHG28P0DPA3 235 aa23.47■■□□□ 1.35
CDPF1-202ENST00000381037 RASGRP2Q7LDG7 609 aa23.47■■□□□ 1.35
CDPF1-202ENST00000381037 NEK1Q96PY6 1258 aa23.47■■□□□ 1.35
CDPF1-202ENST00000381037 MTA3Q9BTC8 594 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms