RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 GPHNQ9NQX3 736 aaPredicted RBP14.9□□□□□ -0.02
SMN1-202ENST00000380707 IFIT3O14879 490 aaKnown RBP14.89□□□□□ -0.03
SMN1-202ENST00000380707 NOGQ13253 232 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 CCDC178Q5BJE1 867 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 KIAA1755Q5JYT7 1200 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 PPP4R3BQ5MIZ7 849 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 BLOC1S2Q6QNY1 142 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 LRRC47Q8N1G4 583 aaKnown RBP14.89□□□□□ -0.03
SMN1-202ENST00000380707 ANKS1AQ92625 1134 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 TBC1D32Q96NH3 1257 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 KIF2CQ99661 725 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 TM6SF1Q9BZW5 370 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 SENP2Q9HC62 589 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 EMILIN3Q9NT22 766 aa14.89□□□□□ -0.03
SMN1-202ENST00000380707 CCL15-CCL14A0A0B4J2E2 113 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 C19orf81C9J6K1 198 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 CETPP11597 493 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 RPS6KB1P23443 525 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 KIF23Q02241 960 aaPredicted RBP14.88□□□□□ -0.03
SMN1-202ENST00000380707 SART3Q15020 963 aaKnown RBP14.88□□□□□ -0.03
SMN1-202ENST00000380707 CCL15Q16663 113 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 TMEM67Q5HYA8 995 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 SH3D19Q5HYK7 790 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 RUFY3Q7L099 469 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 DNAJC5GQ8N7S2 189 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 BRI3BPQ8WY22 251 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 PTPN18Q99952 460 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 UPF3BQ9BZI7 483 aaKnown RBP14.88□□□□□ -0.03
SMN1-202ENST00000380707 SH2D4AQ9H788 454 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 LY9Q9HBG7 655 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 WDR19Q8NEZ3 1342 aa14.88□□□□□ -0.03
SMN1-202ENST00000380707 PTPRFP10586 1907 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 TESPA1A2RU30 521 aaPredicted RBP14.87□□□□□ -0.03
SMN1-202ENST00000380707 MANSC4A6NHS7 340 aaPredicted RBP14.87□□□□□ -0.03
SMN1-202ENST00000380707 SH2B2O14492 632 aaPredicted RBP14.87□□□□□ -0.03
SMN1-202ENST00000380707 TOP1P11387 765 aaKnown RBP14.87□□□□□ -0.03
SMN1-202ENST00000380707 USP14P54578 494 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 IFIT1BQ5T764 474 aaKnown RBP14.87□□□□□ -0.03
SMN1-202ENST00000380707 USP17L2Q6R6M4 530 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 SPICE1Q8N0Z3 855 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 TMEM87BQ96K49 555 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 MTA3Q9BTC8 594 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 VCPKMTQ9H867 229 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 CYP46A1Q9Y6A2 500 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 MYH4Q9Y623 1939 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 ERICH2A1L162 156 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 F5H6K3 240 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 RAD21O60216 631 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 KLRC3Q07444 240 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 WTAPQ15007 396 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 TREML2Q5T2D2 321 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 GADL1Q6ZQY3 521 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 FASTKD5Q7L8L6 764 aaKnown RBP14.87□□□□□ -0.03
SMN1-202ENST00000380707 CHMP4CQ96CF2 233 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 C12orf42Q96LP6 360 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 GOPCQ9HD26 462 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 TMOD4Q9NZQ9 345 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 SYNPO2Q9UMS6 1093 aa14.87□□□□□ -0.03
SMN1-202ENST00000380707 NDUFB10O96000 172 aa14.86□□□□□ -0.03
SMN1-202ENST00000380707 VCAM1P19320 739 aa14.86□□□□□ -0.03
SMN1-202ENST00000380707 MAP2K2P36507 400 aa14.86□□□□□ -0.03
SMN1-202ENST00000380707 TM4SF4P48230 202 aa14.86□□□□□ -0.03
SMN1-202ENST00000380707 GPAT2Q6NUI2 795 aa14.86□□□□□ -0.03
SMN1-202ENST00000380707 Q6ZUG5 572 aa14.86□□□□□ -0.03
SMN1-202ENST00000380707 RASGRP2Q7LDG7 609 aa14.86□□□□□ -0.03
SMN1-202ENST00000380707 PROCA1Q8NCQ7 364 aaPredicted RBP14.86□□□□□ -0.03
SMN1-202ENST00000380707 PNMA1Q8ND90 353 aa14.86□□□□□ -0.03
SMN1-202ENST00000380707 GMCL1P1Q8NEA9 526 aa14.86□□□□□ -0.03
SMN1-202ENST00000380707 KAT14Q9H8E8 782 aa14.86□□□□□ -0.03
SMN1-202ENST00000380707 BTBD19C9JJ37 291 aa14.85□□□□□ -0.03
SMN1-202ENST00000380707 IGF2BP3O00425 579 aaKnown RBP eCLIP14.85□□□□□ -0.03
SMN1-202ENST00000380707 LIFRP42702 1097 aa14.85□□□□□ -0.03
SMN1-202ENST00000380707 INHBEP58166 350 aa14.85□□□□□ -0.03
SMN1-202ENST00000380707 SREBF2Q12772 1141 aa14.85□□□□□ -0.03
SMN1-202ENST00000380707 SLFN13Q68D06 897 aa14.85□□□□□ -0.03
SMN1-202ENST00000380707 FAM43AQ8N2R8 423 aa14.85□□□□□ -0.03
SMN1-202ENST00000380707 LPAR1Q92633 364 aa14.85□□□□□ -0.03
SMN1-202ENST00000380707 NUP88Q99567 741 aaPredicted RBP14.85□□□□□ -0.03
SMN1-202ENST00000380707 MTMR7Q9Y216 660 aa14.85□□□□□ -0.03
SMN1-202ENST00000380707 IFNL1Q8IU54 200 aa14.84□□□□□ -0.03
SMN1-202ENST00000380707 FBXL16Q8N461 479 aa14.84□□□□□ -0.03
SMN1-202ENST00000380707 PDRG1Q9NUG6 133 aa14.84□□□□□ -0.03
SMN1-202ENST00000380707 AGTPBP1Q9UPW5 1226 aa14.84□□□□□ -0.03
SMN1-202ENST00000380707 LOC285556D6RIA3 1793 aa14.84□□□□□ -0.03
SMN1-202ENST00000380707 NEK4P51957 841 aa14.83□□□□□ -0.04
SMN1-202ENST00000380707 FGD1P98174 961 aa14.83□□□□□ -0.04
SMN1-202ENST00000380707 TOB2Q14106 344 aaPredicted RBP14.83□□□□□ -0.04
SMN1-202ENST00000380707 NFXL1Q6ZNB6 911 aa14.83□□□□□ -0.04
SMN1-202ENST00000380707 ANKRD23Q86SG2 305 aa14.83□□□□□ -0.04
SMN1-202ENST00000380707 SGMS1Q86VZ5 419 aa14.83□□□□□ -0.04
SMN1-202ENST00000380707 TMTC2Q8N394 836 aa14.83□□□□□ -0.04
SMN1-202ENST00000380707 BRF1Q92994 677 aa14.83□□□□□ -0.04
SMN1-202ENST00000380707 GMCL1Q96IK5 515 aa14.83□□□□□ -0.04
SMN1-202ENST00000380707 AGXT2Q9BYV1 514 aa14.83□□□□□ -0.04
SMN1-202ENST00000380707 RPAP3Q9H6T3 665 aaPredicted RBP14.83□□□□□ -0.04
SMN1-202ENST00000380707 CCDC69A6NI79 296 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 PDHXO00330 501 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 WDR46O15213 610 aaKnown RBP14.82□□□□□ -0.04
SMN1-202ENST00000380707 SNHG28P0DPA3 235 aa14.82□□□□□ -0.04
SMN1-202ENST00000380707 PDHBP11177 359 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms