RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 FBXW10Q5XX13 1052 aa14.07□□□□□ -0.16
PRPF40B-202ENST00000380281 SUGP1Q8IWZ8 645 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-202ENST00000380281 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.07□□□□□ -0.16
PRPF40B-202ENST00000380281 RABGGTAQ92696 567 aa14.07□□□□□ -0.16
PRPF40B-202ENST00000380281 SHISA4Q96DD7 197 aa14.07□□□□□ -0.16
PRPF40B-202ENST00000380281 CAPZA3Q96KX2 299 aa14.07□□□□□ -0.16
PRPF40B-202ENST00000380281 KRT23Q9C075 422 aa14.07□□□□□ -0.16
PRPF40B-202ENST00000380281 CPVLQ9H3G5 476 aa14.07□□□□□ -0.16
PRPF40B-202ENST00000380281 TFCP2L1Q9NZI6 479 aa14.07□□□□□ -0.16
PRPF40B-202ENST00000380281 GUCA1BQ9UMX6 200 aa14.07□□□□□ -0.16
PRPF40B-202ENST00000380281 CCDC151A5D8V7 595 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 CCP110O43303 1012 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 DEXIO95424 95 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 UQCRFS1P1P0C7P4 283 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 FXR1P51114 621 aaKnown RBP eCLIP14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 GSCP56915 257 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 MDM2Q00987 491 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 DPYDQ12882 1025 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 RIC1Q4ADV7 1423 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 GPKOWQ92917 476 aaPredicted RBP eCLIP14.06□□□□□ -0.163e-7■■■■■ 29.3
PRPF40B-202ENST00000380281 PP2D1A8MPX8 630 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 USP17L12C9JPN9 530 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 USP17L21D6R901 530 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 CCDC175P0C221 793 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 ATP6V1AP38606 617 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 IGHMBP2P38935 993 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 PNKPQ96T60 521 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 ABCB6Q9NP58 842 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 SYNRGQ9UMZ2 1314 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 TRIM49BA6NDI0 452 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 RNF225M0QZC1 329 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 ADAMTS2O95450 1211 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 CYP2D6P10635 497 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 NLRP5P59047 1200 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 BEND6Q5SZJ8 279 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 SLC35F6Q8N357 371 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 VGLL2Q8N8G2 317 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 WASF1Q92558 559 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 PCMTD1Q96MG8 357 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 FAM204AQ9H8W3 233 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 GDAQ9Y2T3 454 aa14.06□□□□□ -0.16
PRPF40B-202ENST00000380281 TUBB4AP04350 444 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 SGMS1Q86VZ5 419 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 MLKLQ8NB16 471 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 CARD10Q9BWT7 1032 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 AATFQ9NY61 560 aaKnown RBP eCLIP14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 SLIT3O75094 1523 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 ARFGEF2Q9Y6D5 1785 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 ACTN4O43707 911 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 KIF5CO60282 957 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 CYP19A1P11511 503 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 CHRNDQ07001 517 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 JAKMIP3Q5VZ66 844 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 NCAPH2Q6IBW4 605 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 HDXQ7Z353 690 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 EFCAB13Q8IY85 973 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 PAGE5Q96GU1 130 aa14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 MKRN1Q9UHC7 482 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-202ENST00000380281 MAGEB6P1A0A0J9YX57 407 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 FAM170AA1A519 330 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 CHMP4BP1P59074 171 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 CUL4BQ13620 913 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 MORC3Q14149 939 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 HSP90B2PQ58FF3 399 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 SWT1Q5T5J6 900 aaKnown RBP14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 SLC51AQ86UW1 340 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 ENAHQ8N8S7 591 aaPredicted RBP14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 LIFRP42702 1097 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 ANKZF1Q9H8Y5 726 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 STX10O60499 249 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 SRGAP2O75044 1071 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 ERLIN2O94905 339 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 IBSPP21815 317 aaPredicted RBP14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 KCNJ6P48051 423 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 DNA2P51530 1060 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 FILIP1LQ4L180 1135 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 ESR2Q92731 530 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 CNNM2Q9H8M5 875 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 HDAC6Q9UBN7 1215 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 DACH1Q9UI36 760 aa14.04□□□□□ -0.16
PRPF40B-202ENST00000380281 MYO5AQ9Y4I1 1855 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 RPS6KA5O75582 802 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 KRT2P35908 639 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 CATIPQ7Z7H3 387 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 ENOX1Q8TC92 643 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 PSMB7Q99436 277 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 CHP1Q99653 195 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 SRPRBQ9Y5M8 271 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 CCDC196A0A1B0GTZ2 297 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 EIF3JO75822 258 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 XBP1P17861 261 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 KLRK1P26718 216 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 PLCD1P51178 756 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 FBXL16Q8N461 479 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 CEP89Q96ST8 783 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 SLAIN2Q9P270 581 aa14.03□□□□□ -0.16
PRPF40B-202ENST00000380281 SCN11AQ9UI33 1791 aa14.02□□□□□ -0.16
PRPF40B-202ENST00000380281 KRT9P35527 623 aa14.02□□□□□ -0.16
PRPF40B-202ENST00000380281 UBXN1Q04323 297 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms