RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 ENC1O14682 589 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 N4BP3O15049 544 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 ERCC5P28715 1186 aaPredicted RBP9.89□□□□□ -0.83
TRIM6-203ENST00000380107 KRT2P35908 639 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 KRT31Q15323 416 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 RRAGBQ5VZM2 374 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 NCAPH2Q6IBW4 605 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 PIK3AP1Q6ZUJ8 805 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 SRGAP1Q7Z6B7 1085 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 TRIML1Q8N9V2 468 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 ZNF579Q8NAF0 562 aaKnown RBP9.89□□□□□ -0.83
TRIM6-203ENST00000380107 PANX2Q96RD6 677 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 NUP88Q99567 741 aaPredicted RBP9.89□□□□□ -0.83
TRIM6-203ENST00000380107 CHP1Q99653 195 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 MTRQ99707 1265 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 HINFPQ9BQA5 517 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 AATFQ9NY61 560 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRIM6-203ENST00000380107 XDHP47989 1333 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 MROH5Q6ZUA9 1318 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 TAF1P21675 1872 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 CCDC196A0A1B0GTZ2 297 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 TRIM49BA6NDI0 452 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 PBX1P40424 430 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 SEC23AQ15436 765 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 FAM47AQ5JRC9 791 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 IFIT1BQ5T764 474 aaKnown RBP9.89□□□□□ -0.83
TRIM6-203ENST00000380107 CDKAL1Q5VV42 579 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 KANK3Q6NY19 840 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 NOA1Q8NC60 698 aaKnown RBP9.89□□□□□ -0.83
TRIM6-203ENST00000380107 PHF20Q9BVI0 1012 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 ABCB6Q9NP58 842 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 VPS18Q9P253 973 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 ADAM21Q9UKJ8 722 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 MTMR7Q9Y216 660 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 JAG2Q9Y219 1238 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 GDAQ9Y2T3 454 aa9.89□□□□□ -0.83
TRIM6-203ENST00000380107 VSNL1P62760 191 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 RAD51AP2Q09MP3 1159 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 IL17AQ16552 155 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 GPIHBP1Q8IV16 184 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 RGS22Q8NE09 1264 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 BBXQ8WY36 941 aaPredicted RBP9.88□□□□□ -0.83
TRIM6-203ENST00000380107 GDAP1L1Q96MZ0 367 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 HDAC6Q9UBN7 1215 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 CDC23Q9UJX2 597 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 COL4A1P02462 1669 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 CHRNDQ07001 517 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 FUT2Q10981 343 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 NPY5RQ15761 445 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 TTC38Q5R3I4 469 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 RASGRP2Q7LDG7 609 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 SH3RF1Q7Z6J0 888 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 ELOA2Q8IYF1 753 aaPredicted RBP9.88□□□□□ -0.83
TRIM6-203ENST00000380107 RASGRP4Q8TDF6 673 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 ESR2Q92731 530 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 ZSCAN10Q96SZ4 725 aaPredicted RBP9.88□□□□□ -0.83
TRIM6-203ENST00000380107 BTG4Q9NY30 223 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 LCMT1Q9UIC8 334 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 GUCA1BQ9UMX6 200 aa9.88□□□□□ -0.83
TRIM6-203ENST00000380107 MYH13Q9UKX3 1938 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 MAGEB6P1A0A0J9YX57 407 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 CTAGE9A4FU28 777 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 PP2D1A8MPX8 630 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 SRGAP2O75044 1071 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 FILIP1LQ4L180 1135 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 BEND6Q5SZJ8 279 aaPredicted RBP9.87□□□□□ -0.83
TRIM6-203ENST00000380107 JAKMIP3Q5VZ66 844 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 RNF26Q9BY78 433 aaPredicted RBP9.87□□□□□ -0.83
TRIM6-203ENST00000380107 ABHD10Q9NUJ1 306 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 ITGB4P16144 1822 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 CCDC151A5D8V7 595 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 KRT9P35527 623 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 SMIM5Q71RC9 77 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 ZNF34Q8IZ26 560 aa9.87□□□□□ -0.83
TRIM6-203ENST00000380107 SRBD1Q8N5C6 995 aaKnown RBP9.87□□□□□ -0.83
TRIM6-203ENST00000380107 RNF41Q9H4P4 317 aaPredicted RBP9.87□□□□□ -0.83
TRIM6-203ENST00000380107 ZMYND10O75800 440 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 XBP1P17861 261 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 ARHGAP25P42331 645 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 PMS1P54277 932 aaKnown RBP9.86□□□□□ -0.83
TRIM6-203ENST00000380107 UBXN1Q04323 297 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 ZSCAN26Q16670 478 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 SKIDA1Q1XH10 827 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 CATIPQ7Z7H3 387 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 TMTC2Q8N394 836 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 NELFBQ8WX92 580 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 GPKOWQ92917 476 aaPredicted RBP eCLIP9.86□□□□□ -0.83
TRIM6-203ENST00000380107 FAN1Q9Y2M0 1017 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 PNPLA7Q6ZV29 1317 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 DOCK2Q92608 1830 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 KCNJ18B7U540 433 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 USP17L12C9JPN9 530 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 USP17L21D6R901 530 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 MAP2K7O14733 419 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 TRIM66O15016 1216 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 CYP2D6P10635 497 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 GNAT2P19087 354 aa9.86□□□□□ -0.83
TRIM6-203ENST00000380107 GTF2E1P29083 439 aaPredicted RBP9.86□□□□□ -0.83
TRIM6-203ENST00000380107 COPB1P53618 953 aaKnown RBP9.86□□□□□ -0.83
TRIM6-203ENST00000380107 NLRP5P59047 1200 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms