RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 PYM1Q9BRP8 204 aaKnown RBP12.8□□□□□ -0.36
SMAD9-202ENST00000379826 IRX2Q9BZI1 471 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-202ENST00000379826 SENP2Q9HC62 589 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
SMAD9-202ENST00000379826 MYO6Q9UM54 1294 aa12.8□□□□□ -0.36
SMAD9-202ENST00000379826 NIP7Q9Y221 180 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMAD9-202ENST00000379826 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 CYP27B1O15528 508 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 PDE8AO60658 829 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 HLTFQ14527 1009 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMAD9-202ENST00000379826 OXER1Q8TDS5 423 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 LPIN2Q92539 896 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 CCDC43Q96MW1 224 aaKnown RBP12.79□□□□□ -0.36
SMAD9-202ENST00000379826 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 ADGRL3Q9HAR2 1447 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 RNASE9P60153 205 aaKnown RBP12.79□□□□□ -0.36
SMAD9-202ENST00000379826 CCDC40Q4G0X9 1142 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 SPATA1Q5VX52 437 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 CALML4Q96GE6 196 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 CEP89Q96ST8 783 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 LUC7LQ9NQ29 371 aaKnown RBP12.79□□□□□ -0.36
SMAD9-202ENST00000379826 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
SMAD9-202ENST00000379826 FAM76AQ8TAV0 307 aa12.79□□□□□ -0.36
SMAD9-202ENST00000379826 CRNKL1Q9BZJ0 848 aaKnown RBP12.79□□□□□ -0.36
SMAD9-202ENST00000379826 RBM28Q9NW13 759 aaKnown RBP12.79□□□□□ -0.36
SMAD9-202ENST00000379826 TSPY3P0CV98 308 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 TSPY8P0CW00 308 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 TTC19Q6DKK2 380 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-202ENST00000379826 ABCB6Q9NP58 842 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 H0YIN7 160 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 GUCY1A2P33402 732 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 DTHD1Q6ZMT9 781 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 ZBTB38Q8NAP3 1195 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-202ENST00000379826 NOC4LQ9BVI4 516 aaKnown RBP12.78□□□□□ -0.36
SMAD9-202ENST00000379826 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 TEX33O43247 280 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 ZEB2O60315 1214 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 GPBP1L1Q9HC44 474 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-202ENST00000379826 ATP2C2O75185 946 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 TACC1O75410 805 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 LCORLQ8N3X6 602 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 VTI1AQ96AJ9 217 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 UBA5Q9GZZ9 404 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 PRM3Q9NNZ6 103 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 CDC23Q9UJX2 597 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 TNKSO95271 1327 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 CDR1P51861 262 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-202ENST00000379826 FMR1Q06787 632 aaKnown RBP eCLIP12.78□□□□□ -0.36
SMAD9-202ENST00000379826 IL17RAQ96F46 866 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 UTYO14607 1347 aa12.78□□□□□ -0.36
SMAD9-202ENST00000379826 JCADQ9P266 1359 aa12.77□□□□□ -0.36
SMAD9-202ENST00000379826 PXDNQ92626 1479 aa12.77□□□□□ -0.36
SMAD9-202ENST00000379826 YY1P25490 414 aa12.77□□□□□ -0.36
SMAD9-202ENST00000379826 ANTXR2P58335 489 aa12.77□□□□□ -0.36
SMAD9-202ENST00000379826 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.36
SMAD9-202ENST00000379826 UBN2Q6ZU65 1347 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 CALM1P0DP23 149 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 CALM2P0DP24 149 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 CALM3P0DP25 149 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 CDC25AP30304 524 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 TBC1D8BQ0IIM8 1120 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 UIMC1Q96RL1 719 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 TECPR2O15040 1411 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 RFX7Q2KHR2 1363 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 NAPAP54920 295 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 PDE4DQ08499 809 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 GOPCQ9HD26 462 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 AATFQ9NY61 560 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMAD9-202ENST00000379826 C3P01024 1663 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 FAM170AA1A519 330 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 SNAP23O00161 211 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 ANKRD18AQ8IVF6 992 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 CSGALNACT2Q8N6G5 542 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 MRFAP1Q9Y605 127 aa12.77□□□□□ -0.37
SMAD9-202ENST00000379826 MPHOSPH10O00566 681 aaKnown RBP12.76□□□□□ -0.37
SMAD9-202ENST00000379826 AMPD3Q01432 767 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 PTGDRQ13258 359 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 TRIM14Q14142 442 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 GOLGA5Q8TBA6 731 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 GPKOWQ92917 476 aaPredicted RBP eCLIP12.76□□□□□ -0.37
SMAD9-202ENST00000379826 PAGE5Q96GU1 130 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 ZSCAN10Q96SZ4 725 aaPredicted RBP12.76□□□□□ -0.37
SMAD9-202ENST00000379826 FAM204AQ9H8W3 233 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 PCCAP05165 728 aaPredicted RBP12.76□□□□□ -0.37
SMAD9-202ENST00000379826 WHAMMP3Q1A5X7 153 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 BMP2KQ9NSY1 1161 aaPredicted RBP12.76□□□□□ -0.37
SMAD9-202ENST00000379826 GOLGA6CA6NDK9 693 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 TMCO5BA8MYB1 307 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 ANKRD65E5RJM6 399 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 GOLGA6DP0CG33 693 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 LETM2Q2VYF4 491 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 RABL6Q3YEC7 729 aaPredicted RBP12.76□□□□□ -0.37
SMAD9-202ENST00000379826 GOLGA6AQ9NYA3 693 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 HPS5Q9UPZ3 1129 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 HEG1Q9ULI3 1381 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
SMAD9-202ENST00000379826 NBPF26B4DH59 902 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms