RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 AFG3L2Q9Y4W6 797 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 CUTAO60888 179 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
LINC00654-201ENST00000379053 KRT40Q6A162 431 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 PPP2R3CQ969Q6 453 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 CLSTN2Q9H4D0 955 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 CAPN9O14815 690 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 CAPN15O75808 1086 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 CSPG5O95196 566 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 MCTP2Q6DN12 878 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 TIGD1Q96MW7 591 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 RPS6KC1Q96S38 1066 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 NRBP2Q9NSY0 501 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 LRFN2Q9ULH4 789 aa12.13□□□□□ -0.47
LINC00654-201ENST00000379053 TNNC2P02585 160 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
LINC00654-201ENST00000379053 SMC5Q8IY18 1101 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 OTUD7AQ8TE49 926 aaPredicted RBP12.12□□□□□ -0.47
LINC00654-201ENST00000379053 MRRFQ96E11 262 aaKnown RBP12.12□□□□□ -0.47
LINC00654-201ENST00000379053 USP26Q9BXU7 913 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 DBNDD1Q9H9R9 158 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 RTEL1Q9NZ71 1219 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 GIGYF1O75420 1035 aaPredicted RBP12.12□□□□□ -0.47
LINC00654-201ENST00000379053 PCCAP05165 728 aaPredicted RBP12.12□□□□□ -0.47
LINC00654-201ENST00000379053 CCDC93Q567U6 631 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 FAM160B1Q5W0V3 765 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 SDR42E1Q8WUS8 393 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 MAP3K15Q6ZN16 1313 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 PNMA6EA0A0J9YXQ4 647 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 IGSF22Q8N9C0 903 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 JCADQ9P266 1359 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 HSPA4P34932 840 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 ITIH3Q06033 890 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 THRAP3Q9Y2W1 955 aaKnown RBP12.12□□□□□ -0.47
LINC00654-201ENST00000379053 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
LINC00654-201ENST00000379053 ZWINTO95229 277 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 IREB2P48200 963 aaKnown RBP12.12□□□□□ -0.47
LINC00654-201ENST00000379053 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
LINC00654-201ENST00000379053 SYNRGQ9UMZ2 1314 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.11□□□□□ -0.47
LINC00654-201ENST00000379053 KCNQ3O43525 872 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 RAD17O75943 681 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 Q3C1V9 767 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 ZNF654Q8IZM8 581 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 PRPF31Q8WWY3 499 aaKnown RBP12.11□□□□□ -0.47
LINC00654-201ENST00000379053 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
LINC00654-201ENST00000379053 ASAP1Q9ULH1 1129 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 AOX1Q06278 1338 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 SPATA31A6Q5VVP1 1343 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 KIAA0232Q92628 1395 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 USP14P54578 494 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 LRMPQ12912 555 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 CUL4BQ13620 913 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 POLA2Q14181 598 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 CASC4Q6P4E1 433 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 APOL6Q9BWW8 343 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 TEKT3Q9BXF9 490 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 GOLGA8HP0CJ92 632 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
LINC00654-201ENST00000379053 TRIM14Q14142 442 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 ARHGAP44Q17R89 818 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 CEP128Q6ZU80 1094 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 PNMA1Q8ND90 353 aa12.11□□□□□ -0.47
LINC00654-201ENST00000379053 CYP2J2P51589 502 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 SLC9C1Q4G0N8 1177 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 PLA2G4DQ86XP0 818 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 ANKS4BQ8N8V4 417 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 UBLCP1Q8WVY7 318 aaPredicted RBP12.1□□□□□ -0.47
LINC00654-201ENST00000379053 SRRTQ9BXP5 876 aaKnown RBP12.1□□□□□ -0.47
LINC00654-201ENST00000379053 RNF181Q9P0P0 153 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 SNX14Q9Y5W7 946 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 KIAA0556O60303 1618 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 TUBB4AP04350 444 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 ATP5JP18859 108 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 KCNA4P22459 653 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 KCNQ4P56696 695 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 GPBP1Q86WP2 473 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 SPICE1Q8N0Z3 855 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 LEMD3Q9Y2U8 911 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 H0YCG3 227 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 BEND3Q5T5X7 828 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 IFNL3Q8IZI9 196 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 SLC10A4Q96EP9 437 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 BAG1Q99933 345 aaPredicted RBP12.1□□□□□ -0.47
LINC00654-201ENST00000379053 ZBED2Q9BTP6 218 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 LRRIQ4A6NIV6 560 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 HSPA1LP34931 641 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 NKIRAS1Q9NYS0 192 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 SGSM2O43147 1006 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 PDE6AP16499 860 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 RNASE9P60153 205 aaKnown RBP12.1□□□□□ -0.47
LINC00654-201ENST00000379053 DSCC1Q9BVC3 393 aa12.1□□□□□ -0.47
LINC00654-201ENST00000379053 E7EWF7 191 aa12.09□□□□□ -0.47
LINC00654-201ENST00000379053 SEMA3EO15041 775 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms