RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 GSG1L2A8MUP6 293 aa22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 RNF113AO15541 343 aaKnown RBP22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 ZFYP08048 801 aaPredicted RBP22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 CYP2B6P20813 491 aa22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 TRIM32Q13049 653 aa22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 COG2Q14746 738 aa22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 AMOTL1Q8IY63 956 aa22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 APPBP2Q92624 585 aa22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 OSBP2Q969R2 916 aa22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 HMX1Q9NP08 348 aaPredicted RBP22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 HOXC10Q9NYD6 342 aa22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 SALL3Q9BXA9 1300 aa22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 GREB1LQ9C091 1923 aaPredicted RBP22.7■■□□□ 1.22
TMEM88B-201ENST00000378821 PARP14Q460N5 1801 aa22.69■■□□□ 1.22
TMEM88B-201ENST00000378821 H0YGN5 161 aa22.69■■□□□ 1.22
TMEM88B-201ENST00000378821 TFRCP02786 760 aaKnown RBP22.69■■□□□ 1.22
TMEM88B-201ENST00000378821 HABP4Q5JVS0 413 aaKnown RBP22.69■■□□□ 1.22
TMEM88B-201ENST00000378821 ANKLE1Q8NAG6 615 aa22.69■■□□□ 1.22
TMEM88B-201ENST00000378821 PI4K2BQ8TCG2 481 aa22.69■■□□□ 1.22
TMEM88B-201ENST00000378821 HTATIP2Q9BUP3 242 aa22.69■■□□□ 1.22
TMEM88B-201ENST00000378821 ARPP21Q9UBL0 812 aaPredicted RBP22.69■■□□□ 1.22
TMEM88B-201ENST00000378821 RGS2P41220 211 aa22.68■■□□□ 1.22
TMEM88B-201ENST00000378821 ARHGEF10LQ9HCE6 1279 aa22.68■■□□□ 1.22
TMEM88B-201ENST00000378821 ZBTB47Q9UFB7 747 aaPredicted RBP22.68■■□□□ 1.22
TMEM88B-201ENST00000378821 ROBO3Q96MS0 1386 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 SLC15A5A6NIM6 579 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 IGHA2P01877 340 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 HOXC6P09630 235 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 MX1P20591 662 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 PTPREP23469 700 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 ICA1Q05084 483 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 MAP2K5Q13163 448 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 CCAR1Q8IX12 1150 aaKnown RBP22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 APBA2Q99767 749 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 SH2D4AQ9H788 454 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 VCPKMTQ9H867 229 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 KANSL2Q9H9L4 492 aa22.67■■□□□ 1.22
TMEM88B-201ENST00000378821 ZNF236Q9UL36 1845 aa22.66■■□□□ 1.22
TMEM88B-201ENST00000378821 GLRX3O76003 335 aaKnown RBP22.66■■□□□ 1.22
TMEM88B-201ENST00000378821 MNX1P50219 401 aaPredicted RBP22.66■■□□□ 1.22
TMEM88B-201ENST00000378821 GRB14Q14449 540 aa22.66■■□□□ 1.22
TMEM88B-201ENST00000378821 B4GALNT3Q6L9W6 998 aa22.66■■□□□ 1.22
TMEM88B-201ENST00000378821 DPF3Q92784 378 aa22.66■■□□□ 1.22
TMEM88B-201ENST00000378821 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.66■■□□□ 1.22
TMEM88B-201ENST00000378821 LNPKQ9C0E8 428 aa22.66■■□□□ 1.22
TMEM88B-201ENST00000378821 OGDHLQ9ULD0 1010 aa22.66■■□□□ 1.22
TMEM88B-201ENST00000378821 ERC2O15083 957 aa22.65■■□□□ 1.22
TMEM88B-201ENST00000378821 PRKAR2AP13861 404 aaKnown RBP22.65■■□□□ 1.22
TMEM88B-201ENST00000378821 ZKSCAN1P17029 563 aaPredicted RBP22.65■■□□□ 1.22
TMEM88B-201ENST00000378821 GNAT2P19087 354 aa22.65■■□□□ 1.22
TMEM88B-201ENST00000378821 CACNB2Q08289 660 aaPredicted RBP22.65■■□□□ 1.22
TMEM88B-201ENST00000378821 CLEC10AQ8IUN9 316 aa22.65■■□□□ 1.22
TMEM88B-201ENST00000378821 MB21D1Q8N884 522 aa22.65■■□□□ 1.22
TMEM88B-201ENST00000378821 ADAMTS5Q9UNA0 930 aa22.65■■□□□ 1.22
TMEM88B-201ENST00000378821 WDR46O15213 610 aaKnown RBP22.64■■□□□ 1.21
TMEM88B-201ENST00000378821 GPAA1O43292 621 aa22.64■■□□□ 1.21
TMEM88B-201ENST00000378821 EEF2P13639 858 aaKnown RBP22.64■■□□□ 1.21
TMEM88B-201ENST00000378821 DSG3P32926 999 aa22.64■■□□□ 1.21
TMEM88B-201ENST00000378821 CCL14Q16627 93 aa22.64■■□□□ 1.21
TMEM88B-201ENST00000378821 LRRFIP1Q32MZ4 808 aaKnown RBP22.64■■□□□ 1.21
TMEM88B-201ENST00000378821 SHCBP1Q8NEM2 672 aa22.64■■□□□ 1.21
TMEM88B-201ENST00000378821 TANGO6Q9C0B7 1094 aa22.64■■□□□ 1.21
TMEM88B-201ENST00000378821 CEP290O15078 2479 aa22.64■■□□□ 1.21
TMEM88B-201ENST00000378821 ALPK3Q96L96 1907 aa22.63■■□□□ 1.21
TMEM88B-201ENST00000378821 STRNO43815 780 aa22.63■■□□□ 1.21
TMEM88B-201ENST00000378821 RASA1P20936 1047 aa22.63■■□□□ 1.21
TMEM88B-201ENST00000378821 PAWRQ96IZ0 340 aaKnown RBP22.63■■□□□ 1.21
TMEM88B-201ENST00000378821 MOV10L1Q9BXT6 1211 aaKnown RBP22.63■■□□□ 1.21
TMEM88B-201ENST00000378821 SPATC1LQ9H0A9 340 aa22.63■■□□□ 1.21
TMEM88B-201ENST00000378821 EPB41L4AQ9HCS5 686 aaPredicted RBP22.63■■□□□ 1.21
TMEM88B-201ENST00000378821 COLQQ9Y215 455 aaPredicted RBP22.63■■□□□ 1.21
TMEM88B-201ENST00000378821 PATL2C9JE40 543 aaKnown RBP22.62■■□□□ 1.21
TMEM88B-201ENST00000378821 M0R2C6 588 aa22.62■■□□□ 1.21
TMEM88B-201ENST00000378821 NUCB1Q02818 461 aa22.62■■□□□ 1.21
TMEM88B-201ENST00000378821 LHX8Q68G74 356 aa22.62■■□□□ 1.21
TMEM88B-201ENST00000378821 NECAB2Q7Z6G3 386 aa22.62■■□□□ 1.21
TMEM88B-201ENST00000378821 CHD1LQ86WJ1 897 aa22.61■■□□□ 1.21
TMEM88B-201ENST00000378821 SPICE1Q8N0Z3 855 aa22.61■■□□□ 1.21
TMEM88B-201ENST00000378821 DIS3LQ8TF46 1054 aaKnown RBP22.61■■□□□ 1.21
TMEM88B-201ENST00000378821 PRO3102Q9H379 93 aa22.61■■□□□ 1.21
TMEM88B-201ENST00000378821 FLRT1Q9NZU1 646 aa22.61■■□□□ 1.21
TMEM88B-201ENST00000378821 STAP2Q9UGK3 403 aa22.61■■□□□ 1.21
TMEM88B-201ENST00000378821 NR2E3Q9Y5X4 410 aa22.61■■□□□ 1.21
TMEM88B-201ENST00000378821 IVNS1ABPQ9Y6Y0 642 aa22.61■■□□□ 1.21
TMEM88B-201ENST00000378821 PDE1AP54750 535 aa22.6■■□□□ 1.21
TMEM88B-201ENST00000378821 ZMYM1Q5SVZ6 1142 aa22.6■■□□□ 1.21
TMEM88B-201ENST00000378821 CWC22Q9HCG8 908 aaKnown RBP22.6■■□□□ 1.21
TMEM88B-201ENST00000378821 NYAP2Q9P242 653 aa22.6■■□□□ 1.21
TMEM88B-201ENST00000378821 COL11A1P12107 1806 aaPredicted RBP22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 IGKV6D-41A0A0C4DH26 115 aa22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 FLOT1O75955 427 aa22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 IFNL3Q8IZI9 196 aa22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 ABRAQ8N0Z2 381 aa22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 NPLOC4Q8TAT6 608 aa22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 ATG4CQ96DT6 458 aa22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 NBPF3Q9H094 633 aa22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 MROH8Q9H579 483 aa22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 GOPCQ9HD26 462 aa22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 FRMPD3Q5JV73 1810 aa22.59■■□□□ 1.21
TMEM88B-201ENST00000378821 MINDY4BA8MYZ0 360 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms