RNA–Protein interactions for RNA: ENST00000378371.6

ARHGEF16-201, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF16, Length 2,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-201ENST00000378371 MYH8P13535 1937 aa17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 CDHR2Q9BYE9 1310 aa17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 NOP2P46087 812 aaKnown RBP17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 AARSP49588 968 aaKnown RBP eCLIP17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 HSP90B2PQ58FF3 399 aa17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 CYP26C1Q6V0L0 522 aa17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 TTLL11Q8NHH1 800 aa17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 EPSTI1Q96J88 318 aa17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 NAPBQ9H115 298 aa17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 CABP5Q9NP86 173 aa17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 MYO6Q9UM54 1294 aa17.3■□□□□ 0.36
ARHGEF16-201ENST00000378371 CASP1P29466 404 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 TRIM14Q14142 442 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 KRT31Q15323 416 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 SMYD4Q8IYR2 804 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 SHISA4Q96DD7 197 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 MTA3Q9BTC8 594 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 LRRC10BA6NIK2 292 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 TRIM75PA6NK02 468 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 PHKA1P46020 1223 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 WTAPQ15007 396 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 LRRC31Q6UY01 552 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 LDHAL6AQ6ZMR3 332 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 STAG1Q8WVM7 1258 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 SYMPKQ92797 1274 aaKnown RBP17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 CTNND2Q9UQB3 1225 aa17.29■□□□□ 0.36
ARHGEF16-201ENST00000378371 DOT1LQ8TEK3 1739 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 MYH6P13533 1939 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 CCDC196A0A1B0GTZ2 297 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 RNF225M0QZC1 329 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 ATP2B1P20020 1258 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 ITGA6P23229 1130 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 TNNT3P45378 269 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 MYH3P11055 1940 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 FAM205CA6NFA0 338 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 MBD4O95243 580 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 UQCRFS1P1P0C7P4 283 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 CCT6AP40227 531 aaKnown RBP17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 MAGEA9P43362 315 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 NOM1Q5C9Z4 860 aaKnown RBP17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 NCAPH2Q6IBW4 605 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 MFSD6Q6ZSS7 791 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 TRAPPC11Q7Z392 1133 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 CMTR1Q8N1G2 835 aaKnown RBP17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 CDCA7Q9BWT1 371 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 ASAP1Q9ULH1 1129 aa17.28■□□□□ 0.36
ARHGEF16-201ENST00000378371 GSG1L2A8MUP6 293 aa17.27■□□□□ 0.36
ARHGEF16-201ENST00000378371 SART3Q15020 963 aaKnown RBP17.27■□□□□ 0.36
ARHGEF16-201ENST00000378371 CTR9Q6PD62 1173 aa17.27■□□□□ 0.36
ARHGEF16-201ENST00000378371 FERMT2Q96AC1 680 aa17.27■□□□□ 0.36
ARHGEF16-201ENST00000378371 GREM2Q9H772 168 aa17.27■□□□□ 0.36
ARHGEF16-201ENST00000378371 FAM204AQ9H8W3 233 aa17.27■□□□□ 0.36
ARHGEF16-201ENST00000378371 REXO2Q9Y3B8 237 aaKnown RBP17.27■□□□□ 0.36
ARHGEF16-201ENST00000378371 PRPF6O94906 941 aaKnown RBP17.27■□□□□ 0.35
ARHGEF16-201ENST00000378371 COPB1P53618 953 aaKnown RBP17.27■□□□□ 0.35
ARHGEF16-201ENST00000378371 USP14P54578 494 aa17.27■□□□□ 0.35
ARHGEF16-201ENST00000378371 SPAG1Q07617 926 aa17.27■□□□□ 0.35
ARHGEF16-201ENST00000378371 ZNF654Q8IZM8 581 aa17.27■□□□□ 0.35
ARHGEF16-201ENST00000378371 FANCBQ8NB91 859 aa17.27■□□□□ 0.35
ARHGEF16-201ENST00000378371 CTCFLQ8NI51 663 aaPredicted RBP17.27■□□□□ 0.35
ARHGEF16-201ENST00000378371 ZKSCAN3Q9BRR0 538 aa17.27■□□□□ 0.35
ARHGEF16-201ENST00000378371 RNF26Q9BY78 433 aaPredicted RBP17.27■□□□□ 0.35
ARHGEF16-201ENST00000378371 XDHP47989 1333 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 EXOC5O00471 708 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 PSMD14O00487 310 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 N4BP3O15049 544 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 PDE8BO95263 885 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 SYF2O95926 243 aaKnown RBP17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 CDC25AP30304 524 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 CCDC82Q8N4S0 544 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 GOLGA6L1Q8N7Z2 621 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 CCDC148Q8NFR7 591 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 SLF1Q9BQI6 1058 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 RWDD2AQ9UIY3 292 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 ZC3H4Q9UPT8 1303 aaKnown RBP17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 ANKRD36CQ5JPF3 1778 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 MYH13Q9UKX3 1938 aa17.26■□□□□ 0.35
ARHGEF16-201ENST00000378371 ANKRD18BA2A2Z9 1011 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 EIF3CLB5ME19 914 aaKnown RBP17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 RNF40O75150 1001 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 BMP15O95972 392 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 EARS2Q5JPH6 523 aaKnown RBP17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 TMTC2Q8N394 836 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 ZBTB9Q96C00 473 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 ZFP91Q96JP5 570 aaPredicted RBP17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 NUP88Q99567 741 aaPredicted RBP17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 EIF3CQ99613 913 aaKnown RBP17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 PHF20Q9BVI0 1012 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 ARMT1Q9H993 441 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 THRAP3Q9Y2W1 955 aaKnown RBP17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 MYH2Q9UKX2 1941 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 PHACTR2O75167 634 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 STARD3NLO95772 234 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 CTSWP56202 376 aa17.25■□□□□ 0.35
ARHGEF16-201ENST00000378371 CORO7P57737 925 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms