RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 PBX1P40424 430 aa13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 DMTNQ08495 405 aa13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 GOLGA8FQ08AF8 430 aa13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 GOLGA8DPQ0D2H9 430 aa13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 PFKFB3Q16875 520 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 RCSD1Q6JBY9 416 aa13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 FBXO38Q6PIJ6 1188 aa13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 CTCFLQ8NI51 663 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 ANKS1AQ92625 1134 aa13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 GTPBP4Q9BZE4 634 aaKnown RBP13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 DNAI1Q9UI46 699 aa13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 PRDM4Q9UKN5 801 aa13.38□□□□□ -0.27
TNFRSF9-201ENST00000377507 PPP1R3GB7ZBB8 358 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 SCG2P13521 617 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 EVX2Q03828 476 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 PTGDRQ13258 359 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 ZNF174Q15697 407 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 PTPN21Q16825 1174 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 NOM1Q5C9Z4 860 aaKnown RBP13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 NLRP3Q96P20 1036 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 PYM1Q9BRP8 204 aaKnown RBP13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 MKRN1Q9UHC7 482 aaKnown RBP13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 V9GYY5 206 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 COL24A1Q17RW2 1714 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 LAMB1P07942 1786 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 NMT2O60551 498 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 GTF2E1P29083 439 aaPredicted RBP13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 TM4SF1P30408 202 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 HSP90AA4PQ58FG1 418 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 PANX2Q96RD6 677 aa13.37□□□□□ -0.27
TNFRSF9-201ENST00000377507 KIAA1551Q9HCM1 1747 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 MAST2Q6P0Q8 1798 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 LRRC10BA6NIK2 292 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 RPS6KA4O75676 772 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 PRDX5P30044 214 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 AFMP43652 599 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 ERCC6LQ2NKX8 1250 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 ARL6IP4Q66PJ3 421 aaKnown RBP13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 PDXDC2PQ6P474 469 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 DGKHQ86XP1 1220 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 CTAGE1Q96RT6 745 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 SH3GLB2Q9NR46 395 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 ADD3Q9UEY8 706 aaKnown RBP13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 PARP3Q9Y6F1 533 aa13.36□□□□□ -0.27
TNFRSF9-201ENST00000377507 ADKP55263 362 aaKnown RBP13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 IL17AQ16552 155 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 FAM47AQ5JRC9 791 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 BICDL1Q6ZP65 573 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 IQUBQ8NA54 791 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 LRRN4CLQ8ND94 238 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 XDHP47989 1333 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 CYP2D6P10635 497 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 KIF5BP33176 963 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 NLRP5P59047 1200 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 SPTY2D1Q68D10 685 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 C4orf32Q8N8J7 132 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 MTRQ99707 1265 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 NAA15Q9BXJ9 866 aaKnown RBP13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 PRDM10Q9NQV6 1147 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 TFCP2L1Q9NZI6 479 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 SYNRGQ9UMZ2 1314 aa13.35□□□□□ -0.27
TNFRSF9-201ENST00000377507 ITIH6Q6UXX5 1313 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 AKR1B15C9JRZ8 316 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 TEX33O43247 280 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 VEGFAP15692 232 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 FECHP22830 423 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 CALML3P27482 149 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 CASP1P29466 404 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 MAP3K9P80192 1104 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 C12orf60Q5U649 245 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 TPTE2Q6XPS3 522 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 PIK3AP1Q6ZUJ8 805 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 TOGARAM2Q6ZUX3 1019 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 IL17RBQ9NRM6 502 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 ZNF446Q9NWS9 450 aa13.34□□□□□ -0.27
TNFRSF9-201ENST00000377507 ROBO3Q96MS0 1386 aa13.33□□□□□ -0.27
TNFRSF9-201ENST00000377507 TSPY2A6NKD2 308 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 EFCAB8A8MWE9 144 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 M0R2N6 131 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 TXNRD3Q86VQ6 643 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 NBPF5PQ86XG9 351 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 TCP11L1Q9NUJ3 509 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 MYH13Q9UKX3 1938 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 ADAMTS3O15072 1205 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 TADA3O75528 432 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 LONP1P36776 959 aaKnown RBP13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 KCNQ4P56696 695 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 KIFC2Q96AC6 838 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 LIMA1Q9UHB6 759 aaKnown RBP13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 RWDD2AQ9UIY3 292 aa13.33□□□□□ -0.28
TNFRSF9-201ENST00000377507 URI1O94763 535 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 USP17L8P0C7I0 530 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 PPP4CP60510 307 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 GABPB1Q06547 395 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 RBL2Q08999 1139 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 GRM4Q14833 912 aa13.32□□□□□ -0.28
TNFRSF9-201ENST00000377507 CCDC178Q5BJE1 867 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms