RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 DZIP1Q86YF9 867 aaKnown RBP18.46■□□□□ 0.55
TRIM27-202ENST00000377199 RPS8P62241 208 aaKnown RBP18.46■□□□□ 0.55
TRIM27-202ENST00000377199 DPYDQ12882 1025 aa18.46■□□□□ 0.55
TRIM27-202ENST00000377199 DHX8Q14562 1220 aaKnown RBP18.46■□□□□ 0.55
TRIM27-202ENST00000377199 RRAGBQ5VZM2 374 aa18.46■□□□□ 0.55
TRIM27-202ENST00000377199 KRT222Q8N1A0 295 aa18.46■□□□□ 0.55
TRIM27-202ENST00000377199 CRNKL1Q9BZJ0 848 aaKnown RBP18.46■□□□□ 0.55
TRIM27-202ENST00000377199 VPS16Q9H269 839 aa18.46■□□□□ 0.55
TRIM27-202ENST00000377199 CICQ96RK0 1608 aaPredicted RBP18.46■□□□□ 0.55
TRIM27-202ENST00000377199 KCNJ6P48051 423 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 PIP4K2BP78356 416 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 BRIP1Q9BX63 1249 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 RBM28Q9NW13 759 aaKnown RBP18.45■□□□□ 0.54
TRIM27-202ENST00000377199 PARP3Q9Y6F1 533 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 NID2Q14112 1375 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 CNTNAP5Q8WYK1 1306 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 SEC31AO94979 1220 aaKnown RBP18.45■□□□□ 0.54
TRIM27-202ENST00000377199 CUL4BQ13620 913 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 NPY5RQ15761 445 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 CCDC12Q8WUD4 166 aaPredicted RBP18.45■□□□□ 0.54
TRIM27-202ENST00000377199 MRPL44Q9H9J2 332 aaKnown RBP18.45■□□□□ 0.54
TRIM27-202ENST00000377199 PHLPP2Q6ZVD8 1323 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 AKR1B15C9JRZ8 316 aaPredicted RBP18.45■□□□□ 0.54
TRIM27-202ENST00000377199 SCG2P13521 617 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 TBX2Q13207 712 aaPredicted RBP18.45■□□□□ 0.54
TRIM27-202ENST00000377199 NR1I3Q14994 352 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 CPVLQ9H3G5 476 aa18.45■□□□□ 0.54
TRIM27-202ENST00000377199 TFAP4Q01664 338 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 RASGRP2Q7LDG7 609 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 STAG2Q8N3U4 1231 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 TRIML1Q8N9V2 468 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 DOCK2Q92608 1830 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 PP2D1A8MPX8 630 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 STX10O60499 249 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 CASP14P31944 242 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 USP5P45974 858 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 DIXDC1Q155Q3 683 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 SLC44A5Q8NCS7 719 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 ANKIB1Q9P2G1 1089 aa18.44■□□□□ 0.54
TRIM27-202ENST00000377199 SPATA1Q5VX52 437 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 STX8Q9UNK0 236 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 MORC2Q9Y6X9 1032 aaPredicted RBP18.43■□□□□ 0.54
TRIM27-202ENST00000377199 TIAM2Q8IVF5 1701 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 USP17L3A6NCW0 530 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 USP17L4A6NCW7 530 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 GNPATO15228 680 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 GOLGA8HP0CJ92 632 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 CALM1P0DP23 149 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 CALM2P0DP24 149 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 CALM3P0DP25 149 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 USP17L1Q7RTZ2 530 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 KAT14Q9H8E8 782 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 TAB2Q9NYJ8 693 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 SAP30BPQ9UHR5 308 aaKnown RBP18.43■□□□□ 0.54
TRIM27-202ENST00000377199 BCL9LQ86UU0 1499 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 XDHP47989 1333 aa18.43■□□□□ 0.54
TRIM27-202ENST00000377199 ERCC5P28715 1186 aaPredicted RBP18.42■□□□□ 0.54
TRIM27-202ENST00000377199 SF3B3Q15393 1217 aaKnown RBP18.42■□□□□ 0.54
TRIM27-202ENST00000377199 IL17AQ16552 155 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 FERMT2Q96AC1 680 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 MTA3Q9BTC8 594 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 GDAQ9Y2T3 454 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 A0A1B0GTH6 734 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 N4BP3O15049 544 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 RCAN1P53805 252 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 RAD9BQ6WBX8 426 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 SPATA20Q8TB22 786 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 MKNK2Q9HBH9 465 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 MYH6P13533 1939 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 NHSL1Q5SYE7 1610 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 ARAP2Q8WZ64 1704 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 PPP2R5BQ15173 497 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 IQUBQ8NA54 791 aa18.42■□□□□ 0.54
TRIM27-202ENST00000377199 FAM205AQ6ZU69 1335 aa18.41■□□□□ 0.54
TRIM27-202ENST00000377199 PPP1R3GB7ZBB8 358 aa18.41■□□□□ 0.54
TRIM27-202ENST00000377199 DDAH1O94760 285 aa18.41■□□□□ 0.54
TRIM27-202ENST00000377199 TFRCP02786 760 aaKnown RBP18.41■□□□□ 0.54
TRIM27-202ENST00000377199 FILIP1LQ4L180 1135 aa18.41■□□□□ 0.54
TRIM27-202ENST00000377199 GTPBP4Q9BZE4 634 aaKnown RBP18.41■□□□□ 0.54
TRIM27-202ENST00000377199 MYO1BO43795 1136 aa18.41■□□□□ 0.54
TRIM27-202ENST00000377199 ZPR1O75312 459 aa18.41■□□□□ 0.54
TRIM27-202ENST00000377199 ATP2C1P98194 919 aaPredicted RBP18.41■□□□□ 0.54
TRIM27-202ENST00000377199 HEATR3Q7Z4Q2 680 aa18.41■□□□□ 0.54
TRIM27-202ENST00000377199 FBXO33Q7Z6M2 555 aa18.41■□□□□ 0.54
TRIM27-202ENST00000377199 MTRQ99707 1265 aa18.41■□□□□ 0.54
TRIM27-202ENST00000377199 CDCA7Q9BWT1 371 aaPredicted RBP18.41■□□□□ 0.54
TRIM27-202ENST00000377199 PUF60Q9UHX1 559 aaKnown RBP18.41■□□□□ 0.54
TRIM27-202ENST00000377199 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
TRIM27-202ENST00000377199 CCDC175P0C221 793 aa18.4■□□□□ 0.54
TRIM27-202ENST00000377199 FXR1P51114 621 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRIM27-202ENST00000377199 PPP2R3AQ06190 1150 aa18.4■□□□□ 0.54
TRIM27-202ENST00000377199 TMCO3Q6UWJ1 677 aa18.4■□□□□ 0.54
TRIM27-202ENST00000377199 CLEC4GQ6UXB4 293 aa18.4■□□□□ 0.54
TRIM27-202ENST00000377199 TNFRSF25Q93038 417 aa18.4■□□□□ 0.54
TRIM27-202ENST00000377199 ERICH4A6NGS2 130 aa18.4■□□□□ 0.54
TRIM27-202ENST00000377199 H2AFXP16104 143 aaPredicted RBP18.4■□□□□ 0.54
TRIM27-202ENST00000377199 ELOA2Q8IYF1 753 aaPredicted RBP18.4■□□□□ 0.54
TRIM27-202ENST00000377199 PNMA1Q8ND90 353 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms