RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 TCEANC2Q96MN5 208 aa15.44■□□□□ 0.06
TIMP1-202ENST00000377017 TMEM47Q9BQJ4 181 aa15.44■□□□□ 0.06
TIMP1-202ENST00000377017 LRRC2Q9BYS8 371 aa15.44■□□□□ 0.06
TIMP1-202ENST00000377017 TMOD4Q9NZQ9 345 aa15.44■□□□□ 0.06
TIMP1-202ENST00000377017 KCNH4Q9UQ05 1017 aa15.44■□□□□ 0.06
TIMP1-202ENST00000377017 PTPRFP10586 1907 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 ST18O60284 1047 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 HSPA6P17066 643 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 RCSD1Q6JBY9 416 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 CATIPQ7Z7H3 387 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 LRRC47Q8N1G4 583 aaKnown RBP15.43■□□□□ 0.06
TIMP1-202ENST00000377017 FBXL16Q8N461 479 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 PNMA1Q8ND90 353 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 GMCL1P1Q8NEA9 526 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 ACER1Q8TDN7 264 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 LPAR1Q92633 364 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 KIF2CQ99661 725 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 VCPKMTQ9H867 229 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 LY9Q9HBG7 655 aa15.43■□□□□ 0.06
TIMP1-202ENST00000377017 A0A1W2PRG0 241 aa15.42■□□□□ 0.06
TIMP1-202ENST00000377017 MANSC4A6NHS7 340 aaPredicted RBP15.42■□□□□ 0.06
TIMP1-202ENST00000377017 RAD21O60216 631 aa15.42■□□□□ 0.06
TIMP1-202ENST00000377017 CETPP11597 493 aa15.42■□□□□ 0.06
TIMP1-202ENST00000377017 HMGCS2P54868 508 aa15.42■□□□□ 0.06
TIMP1-202ENST00000377017 ZYXQ15942 572 aaKnown RBP15.42■□□□□ 0.06
TIMP1-202ENST00000377017 SH3D19Q5HYK7 790 aa15.42■□□□□ 0.06
TIMP1-202ENST00000377017 FASTKD5Q7L8L6 764 aaKnown RBP15.42■□□□□ 0.06
TIMP1-202ENST00000377017 SGMS1Q86VZ5 419 aa15.42■□□□□ 0.06
TIMP1-202ENST00000377017 SIAH1Q8IUQ4 282 aa15.42■□□□□ 0.06
TIMP1-202ENST00000377017 PROCA1Q8NCQ7 364 aaPredicted RBP15.42■□□□□ 0.06
TIMP1-202ENST00000377017 ALDH8A1Q9H2A2 487 aaPredicted RBP15.42■□□□□ 0.06
TIMP1-202ENST00000377017 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
TIMP1-202ENST00000377017 LOC285556D6RIA3 1793 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 A0A0G2JLL6 359 aaPredicted RBP15.41■□□□□ 0.06
TIMP1-202ENST00000377017 DDAH1O94760 285 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 CALM1P0DP23 149 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 CALM2P0DP24 149 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 CALM3P0DP25 149 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 GJA5P36382 358 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 MKRN3Q13064 507 aaKnown RBP15.41■□□□□ 0.06
TIMP1-202ENST00000377017 NOGQ13253 232 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 GRM1Q13255 1194 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 COL9A3Q14050 684 aaPredicted RBP15.41■□□□□ 0.06
TIMP1-202ENST00000377017 CYP4F22Q6NT55 531 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 PRRT2Q7Z6L0 340 aaPredicted RBP15.41■□□□□ 0.06
TIMP1-202ENST00000377017 BRF1Q92994 677 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 CAPNS2Q96L46 248 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 C12orf42Q96LP6 360 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 AGXT2Q9BYV1 514 aa15.41■□□□□ 0.06
TIMP1-202ENST00000377017 F5H6K3 240 aa15.4■□□□□ 0.06
TIMP1-202ENST00000377017 WDR46O15213 610 aaKnown RBP15.4■□□□□ 0.06
TIMP1-202ENST00000377017 INHBEP58166 350 aa15.4■□□□□ 0.06
TIMP1-202ENST00000377017 KLRC3Q07444 240 aa15.4■□□□□ 0.06
TIMP1-202ENST00000377017 SREBF2Q12772 1141 aa15.4■□□□□ 0.06
TIMP1-202ENST00000377017 PABPC4Q13310 644 aaKnown RBP eCLIP15.4■□□□□ 0.065e-74■■□□□ 12.4
TIMP1-202ENST00000377017 SLFN13Q68D06 897 aa15.4■□□□□ 0.06
TIMP1-202ENST00000377017 GADL1Q6ZQY3 521 aa15.4■□□□□ 0.06
TIMP1-202ENST00000377017 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
TIMP1-202ENST00000377017 ZNF654Q8IZM8 581 aa15.4■□□□□ 0.06
TIMP1-202ENST00000377017 DCAF4Q8WV16 495 aa15.4■□□□□ 0.06
TIMP1-202ENST00000377017 CCL15-CCL14A0A0B4J2E2 113 aa15.39■□□□□ 0.05
TIMP1-202ENST00000377017 KLF18A0A0U1RQI7 1052 aa15.39■□□□□ 0.05
TIMP1-202ENST00000377017 FAM155AB1AL88 458 aaPredicted RBP15.39■□□□□ 0.05
TIMP1-202ENST00000377017 NDUFB10O96000 172 aa15.39■□□□□ 0.05
TIMP1-202ENST00000377017 SLC1A4P43007 532 aa15.39■□□□□ 0.05
TIMP1-202ENST00000377017 RCAN1P53805 252 aa15.39■□□□□ 0.05
TIMP1-202ENST00000377017 AK2P54819 239 aa15.39■□□□□ 0.05
TIMP1-202ENST00000377017 CCL15Q16663 113 aa15.39■□□□□ 0.05
TIMP1-202ENST00000377017 GMCL1Q96IK5 515 aa15.39■□□□□ 0.05
TIMP1-202ENST00000377017 GPHNQ9NQX3 736 aaPredicted RBP15.39■□□□□ 0.05
TIMP1-202ENST00000377017 EMILIN3Q9NT22 766 aa15.39■□□□□ 0.05
TIMP1-202ENST00000377017 ISY1Q9ULR0 285 aaKnown RBP15.39■□□□□ 0.05
TIMP1-202ENST00000377017 NAP1L2Q9ULW6 460 aaPredicted RBP15.39■□□□□ 0.05
TIMP1-202ENST00000377017 MTMR7Q9Y216 660 aa15.39■□□□□ 0.05
TIMP1-202ENST00000377017 ZBTB43O43298 467 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 VCAM1P19320 739 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 KIF5BP33176 963 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 MCM2P49736 904 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 APOBRQ0VD83 1088 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
TIMP1-202ENST00000377017 CCDC96Q2M329 555 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 ASPRV1Q53RT3 343 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 GPATCH4Q5T3I0 446 aaKnown RBP15.38■□□□□ 0.05
TIMP1-202ENST00000377017 OTUD7BQ6GQQ9 843 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 APOA5Q6Q788 366 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 SPICE1Q8N0Z3 855 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 CTCFLQ8NI51 663 aaPredicted RBP15.38■□□□□ 0.05
TIMP1-202ENST00000377017 NUP133Q8WUM0 1156 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 MS4A4AQ96JQ5 239 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 MAP3K14Q99558 947 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 SENP2Q9HC62 589 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 AGTPBP1Q9UPW5 1226 aa15.38■□□□□ 0.05
TIMP1-202ENST00000377017 TESPA1A2RU30 521 aaPredicted RBP15.37■□□□□ 0.05
TIMP1-202ENST00000377017 GOLGA8BA8MQT2 603 aa15.37■□□□□ 0.05
TIMP1-202ENST00000377017 PARP1P09874 1014 aaKnown RBP15.37■□□□□ 0.05
TIMP1-202ENST00000377017 SNHG28P0DPA3 235 aa15.37■□□□□ 0.05
TIMP1-202ENST00000377017 PDHBP11177 359 aa15.37■□□□□ 0.05
TIMP1-202ENST00000377017 BMP3P12645 472 aa15.37■□□□□ 0.05
TIMP1-202ENST00000377017 TROAPQ12815 778 aa15.37■□□□□ 0.05
TIMP1-202ENST00000377017 PPP2R5BQ15173 497 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms