RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 KIFC2Q96AC6 838 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 NOL10Q9BSC4 688 aaKnown RBP10.99□□□□□ -0.65
TRIM39-202ENST00000376659 CABP5Q9NP86 173 aa10.99□□□□□ -0.65
TRIM39-202ENST00000376659 SLFN14P0C7P3 912 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 CALM1P0DP23 149 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 CALM2P0DP24 149 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 CALM3P0DP25 149 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 RRP12Q5JTH9 1297 aaKnown RBP10.98□□□□□ -0.65
TRIM39-202ENST00000376659 SYMPKQ92797 1274 aaKnown RBP10.98□□□□□ -0.65
TRIM39-202ENST00000376659 PHLPP2Q6ZVD8 1323 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 BAZ2BQ9UIF8 2168 aaKnown RBP10.98□□□□□ -0.65
TRIM39-202ENST00000376659 GRM4Q14833 912 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 NAALADL2Q58DX5 795 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 IFIT1BQ5T764 474 aaKnown RBP10.98□□□□□ -0.65
TRIM39-202ENST00000376659 TRIM22Q8IYM9 498 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 CNNM3Q8NE01 707 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 ANKRD2Q9GZV1 360 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 ZNF446Q9NWS9 450 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 RAI14Q9P0K7 980 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 hCG_1642624A0A1W2PR95 340 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 IL1R1P14778 569 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 ERCC5P28715 1186 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-202ENST00000376659 TRIM29Q14134 588 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 NFIXQ14938 502 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 ZNF827Q17R98 1081 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 CAVIN4Q5BKX8 364 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 FILIP1Q7Z7B0 1213 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 MLKLQ8NB16 471 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 SH3GLB2Q9NR46 395 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 TFCP2L1Q9NZI6 479 aa10.98□□□□□ -0.65
TRIM39-202ENST00000376659 GAKO14976 1311 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 HIBADHP31937 336 aaKnown RBP10.97□□□□□ -0.65
TRIM39-202ENST00000376659 GOLGA8FQ08AF8 430 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 GOLGA8DPQ0D2H9 430 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 DRC7Q8IY82 874 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 SH3RF3Q8TEJ3 882 aaPredicted RBP10.97□□□□□ -0.65
TRIM39-202ENST00000376659 UBAC1Q9BSL1 405 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 GNL3LQ9NVN8 582 aaKnown RBP10.97□□□□□ -0.65
TRIM39-202ENST00000376659 MINDY4BA8MYZ0 360 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 BRD2P25440 801 aaKnown RBP10.97□□□□□ -0.65
TRIM39-202ENST00000376659 GRAPQ13588 217 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 PTPN21Q16825 1174 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 GRAPLQ8TC17 118 aaPredicted RBP10.97□□□□□ -0.65
TRIM39-202ENST00000376659 FERMT2Q96AC1 680 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 ABCF2Q9UG63 623 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 USP17L8P0C7I0 530 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 SCG2P13521 617 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 H2AFXP16104 143 aaPredicted RBP10.97□□□□□ -0.65
TRIM39-202ENST00000376659 SAMSN1Q9NSI8 373 aaKnown RBP10.97□□□□□ -0.65
TRIM39-202ENST00000376659 PARP3Q9Y6F1 533 aa10.97□□□□□ -0.65
TRIM39-202ENST00000376659 V9GY48 417 aaPredicted RBP10.97□□□□□ -0.65
TRIM39-202ENST00000376659 PALM3A6NDB9 673 aaPredicted RBP10.96□□□□□ -0.65
TRIM39-202ENST00000376659 LRRC10BA6NIK2 292 aa10.96□□□□□ -0.65
TRIM39-202ENST00000376659 CASP1P29466 404 aa10.96□□□□□ -0.65
TRIM39-202ENST00000376659 TRAPPC10P48553 1259 aa10.96□□□□□ -0.65
TRIM39-202ENST00000376659 RHBDL3P58872 404 aa10.96□□□□□ -0.65
TRIM39-202ENST00000376659 TPD52L1Q16890 204 aaPredicted RBP10.96□□□□□ -0.65
TRIM39-202ENST00000376659 FAM47AQ5JRC9 791 aa10.96□□□□□ -0.65
TRIM39-202ENST00000376659 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
TRIM39-202ENST00000376659 ADD3Q9UEY8 706 aaKnown RBP10.96□□□□□ -0.65
TRIM39-202ENST00000376659 FER1L6Q2WGJ9 1857 aa10.96□□□□□ -0.65
TRIM39-202ENST00000376659 GOLGB1Q14789 3259 aaKnown RBP10.96□□□□□ -0.65
TRIM39-202ENST00000376659 STXBP3O00186 592 aa10.96□□□□□ -0.65
TRIM39-202ENST00000376659 KLRC4O43908 158 aa10.96□□□□□ -0.65
TRIM39-202ENST00000376659 RASGRP2Q7LDG7 609 aa10.96□□□□□ -0.65
TRIM39-202ENST00000376659 ZNF215Q9UL58 517 aaPredicted RBP10.96□□□□□ -0.65
TRIM39-202ENST00000376659 RASA1P20936 1047 aa10.96□□□□□ -0.66
TRIM39-202ENST00000376659 UBASH3AP57075 661 aa10.96□□□□□ -0.66
TRIM39-202ENST00000376659 KMT5BQ4FZB7 885 aa10.96□□□□□ -0.66
TRIM39-202ENST00000376659 DNTTIP2Q5QJE6 756 aaKnown RBP10.96□□□□□ -0.66
TRIM39-202ENST00000376659 CATIPQ7Z7H3 387 aa10.96□□□□□ -0.66
TRIM39-202ENST00000376659 DGKHQ86XP1 1220 aa10.96□□□□□ -0.66
TRIM39-202ENST00000376659 CEP131Q9UPN4 1083 aa10.96□□□□□ -0.66
TRIM39-202ENST00000376659 ITIH6Q6UXX5 1313 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 IGKV6D-41A0A0C4DH26 115 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 TRIM75PA6NK02 468 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 SMC2O95347 1197 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 ZSCAN20P17040 1043 aaPredicted RBP10.95□□□□□ -0.66
TRIM39-202ENST00000376659 TRMT44Q8IYL2 757 aaKnown RBP10.95□□□□□ -0.66
TRIM39-202ENST00000376659 CCDC82Q8N4S0 544 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 ERICH2A1L162 156 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 GNPATO15228 680 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 DHX8Q14562 1220 aaKnown RBP10.95□□□□□ -0.66
TRIM39-202ENST00000376659 TTC38Q5R3I4 469 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 TOGARAM2Q6ZUX3 1019 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 IRF2BP1Q8IU81 584 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 NUP133Q8WUM0 1156 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 PCDHA6Q9UN73 950 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 NFE2L3Q9Y4A8 694 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 PCDHA8Q9Y5H6 950 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 GPSM2P81274 684 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 PTPN14Q15678 1187 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 WWC2Q6AWC2 1192 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 PRR5LQ6MZQ0 368 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 C16orf86Q6ZW13 317 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 FAM177A1Q8N128 213 aaPredicted RBP10.95□□□□□ -0.66
TRIM39-202ENST00000376659 GSDMAQ96QA5 445 aa10.95□□□□□ -0.66
TRIM39-202ENST00000376659 CRNKL1Q9BZJ0 848 aaKnown RBP10.95□□□□□ -0.66
TRIM39-202ENST00000376659 PTGDRQ13258 359 aa10.94□□□□□ -0.66
TRIM39-202ENST00000376659 ARL6IP4Q66PJ3 421 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms