RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 USP17L11C9JVI0 530 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 USP17L18D6R9N7 530 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 USP17L22D6RA61 530 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 USP17L17D6RBQ6 530 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 USP17L19D6RCP7 530 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 USP17L20D6RJB6 530 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 TSPY3P0CV98 308 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 TSPY8P0CW00 308 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 HERVK_113P62684 666 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 USP17L24Q0WX57 530 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 RUFY2Q8WXA3 655 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 TRIM47Q96LD4 638 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 RBPJLQ9UBG7 517 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 TAF6LQ9Y6J9 622 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 RLFQ13129 1914 aa18.95■□□□□ 0.62
C11orf88-202ENST00000375618 CNMDO75829 334 aa18.94■□□□□ 0.62
C11orf88-202ENST00000375618 RRP12Q5JTH9 1297 aaKnown RBP18.94■□□□□ 0.62
C11orf88-202ENST00000375618 AKNAD1Q5T1N1 836 aa18.94■□□□□ 0.62
C11orf88-202ENST00000375618 LRRC47Q8N1G4 583 aaKnown RBP18.94■□□□□ 0.62
C11orf88-202ENST00000375618 ESYT1Q9BSJ8 1104 aa18.94■□□□□ 0.62
C11orf88-202ENST00000375618 EFCC1Q9HA90 598 aa18.94■□□□□ 0.62
C11orf88-202ENST00000375618 CLIP2Q9UDT6 1046 aa18.94■□□□□ 0.62
C11orf88-202ENST00000375618 TSPY2A6NKD2 308 aa18.93■□□□□ 0.62
C11orf88-202ENST00000375618 ZNF213O14771 459 aa18.93■□□□□ 0.62
C11orf88-202ENST00000375618 RANBP6O60518 1105 aaKnown RBP18.93■□□□□ 0.62
C11orf88-202ENST00000375618 PSMC4P43686 418 aa18.93■□□□□ 0.62
C11orf88-202ENST00000375618 FAM110CQ1W6H9 321 aa18.93■□□□□ 0.62
C11orf88-202ENST00000375618 MKL1Q969V6 931 aa18.93■□□□□ 0.62
C11orf88-202ENST00000375618 ABHD8Q96I13 439 aa18.93■□□□□ 0.62
C11orf88-202ENST00000375618 NUP88Q99567 741 aaPredicted RBP18.93■□□□□ 0.62
C11orf88-202ENST00000375618 SH2D4AQ9H788 454 aa18.93■□□□□ 0.62
C11orf88-202ENST00000375618 MORF4L1Q9UBU8 362 aa18.93■□□□□ 0.62
C11orf88-202ENST00000375618 SPDYE16A6NNV3 312 aaPredicted RBP18.92■□□□□ 0.62
C11orf88-202ENST00000375618 NDUFB10O96000 172 aa18.92■□□□□ 0.62
C11orf88-202ENST00000375618 GCLCP48506 637 aaPredicted RBP18.92■□□□□ 0.62
C11orf88-202ENST00000375618 NOVP48745 357 aa18.92■□□□□ 0.62
C11orf88-202ENST00000375618 Q3C1V9 767 aa18.92■□□□□ 0.62
C11orf88-202ENST00000375618 LPAR1Q92633 364 aa18.92■□□□□ 0.62
C11orf88-202ENST00000375618 TOMM22Q9NS69 142 aa18.92■□□□□ 0.62
C11orf88-202ENST00000375618 FBXO28Q9NVF7 368 aa18.92■□□□□ 0.62
C11orf88-202ENST00000375618 MYH4Q9Y623 1939 aa18.92■□□□□ 0.62
C11orf88-202ENST00000375618 PARP14Q460N5 1801 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 HTTP42858 3142 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 F5H6K3 240 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 TTLL1O95922 423 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 KLRC3Q07444 240 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 FAM83BQ5T0W9 1011 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 FBXO46Q6PJ61 603 aaPredicted RBP18.91■□□□□ 0.62
C11orf88-202ENST00000375618 MFSD6Q6ZSS7 791 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 RASGRP2Q7LDG7 609 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 TANGO6Q9C0B7 1094 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 LSG1Q9H089 658 aaKnown RBP18.91■□□□□ 0.62
C11orf88-202ENST00000375618 BTBD7Q9P203 1132 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 HPS5Q9UPZ3 1129 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 PTPN22Q9Y2R2 807 aa18.91■□□□□ 0.62
C11orf88-202ENST00000375618 MGAMO43451 1857 aa18.9■□□□□ 0.62
C11orf88-202ENST00000375618 WDR46O15213 610 aaKnown RBP18.9■□□□□ 0.62
C11orf88-202ENST00000375618 RAD21O60216 631 aa18.9■□□□□ 0.62
C11orf88-202ENST00000375618 CYP21A2P08686 494 aa18.9■□□□□ 0.62
C11orf88-202ENST00000375618 IMMTQ16891 758 aaKnown RBP18.9■□□□□ 0.62
C11orf88-202ENST00000375618 MAP4K1Q92918 833 aa18.9■□□□□ 0.62
C11orf88-202ENST00000375618 PAGR1Q9BTK6 254 aa18.9■□□□□ 0.62
C11orf88-202ENST00000375618 GOPCQ9HD26 462 aa18.9■□□□□ 0.62
C11orf88-202ENST00000375618 CTNNA3Q9UI47 895 aa18.9■□□□□ 0.62
C11orf88-202ENST00000375618 GABRQQ9UN88 632 aa18.9■□□□□ 0.62
C11orf88-202ENST00000375618 PTCH2Q9Y6C5 1203 aa18.9■□□□□ 0.62
C11orf88-202ENST00000375618 A0A0G2JMZ2 1700 aa18.9■□□□□ 0.62
C11orf88-202ENST00000375618 B4E1Z4 1266 aa18.89■□□□□ 0.61
C11orf88-202ENST00000375618 FMNL1O95466 1100 aaPredicted RBP18.89■□□□□ 0.61
C11orf88-202ENST00000375618 DSG3P32926 999 aa18.89■□□□□ 0.61
C11orf88-202ENST00000375618 KIF22Q14807 665 aa18.89■□□□□ 0.61
C11orf88-202ENST00000375618 PKN2Q16513 984 aaKnown RBP18.89■□□□□ 0.61
C11orf88-202ENST00000375618 RCSD1Q6JBY9 416 aa18.89■□□□□ 0.61
C11orf88-202ENST00000375618 LBX2Q6XYB7 198 aa18.89■□□□□ 0.61
C11orf88-202ENST00000375618 STOX1Q6ZVD7 989 aa18.89■□□□□ 0.61
C11orf88-202ENST00000375618 CHMP4CQ96CF2 233 aa18.89■□□□□ 0.61
C11orf88-202ENST00000375618 ATG4CQ96DT6 458 aa18.89■□□□□ 0.61
C11orf88-202ENST00000375618 PORCNQ9H237 461 aa18.89■□□□□ 0.61
C11orf88-202ENST00000375618 KDM4AO75164 1064 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 CDC45O75419 566 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 FLOT1O75955 427 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 PCP11498 1178 aaKnown RBP18.88■□□□□ 0.61
C11orf88-202ENST00000375618 ERVK-9P63128 1117 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 ERVK-24P63145 666 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 PRKCZQ05513 592 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 COG2Q14746 738 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 GMCL1P1Q8NEA9 526 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 ZKSCAN3Q9BRR0 538 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 RNF41Q9H4P4 317 aaPredicted RBP18.88■□□□□ 0.61
C11orf88-202ENST00000375618 TCP11L1Q9NUJ3 509 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 SRRDQ9UH36 339 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 STX8Q9UNK0 236 aa18.88■□□□□ 0.61
C11orf88-202ENST00000375618 RBM8AQ9Y5S9 174 aaKnown RBP18.88■□□□□ 0.61
C11orf88-202ENST00000375618 U3KPZ7 1027 aaPredicted RBP18.88■□□□□ 0.61
C11orf88-202ENST00000375618 FCGRTP55899 365 aa18.87■□□□□ 0.61
C11orf88-202ENST00000375618 COL9A3Q14050 684 aaPredicted RBP18.87■□□□□ 0.61
C11orf88-202ENST00000375618 SLFN13Q68D06 897 aa18.87■□□□□ 0.61
C11orf88-202ENST00000375618 GPRC5AQ8NFJ5 357 aa18.87■□□□□ 0.61
C11orf88-202ENST00000375618 SYNPO2Q9UMS6 1093 aa18.87■□□□□ 0.61
C11orf88-202ENST00000375618 RABGAP1Q9Y3P9 1069 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms