RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 NF2P35240 595 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 TOGARAM2Q6ZUX3 1019 aa13.73□□□□□ -0.21
C9orf3-203ENST00000375315 BSDC1Q9NW68 430 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-203ENST00000375315 LRRIQ3A6PVS8 624 aaPredicted RBP13.72□□□□□ -0.21
C9orf3-203ENST00000375315 PRKAB2O43741 272 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 ERCC3P19447 782 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 FGFR2P21802 821 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 MYL5Q02045 173 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 SF3A1Q15459 793 aaKnown RBP13.72□□□□□ -0.21
C9orf3-203ENST00000375315 DPF2Q92785 391 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 CLIC6Q96NY7 704 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 CTAGE15A4D2H0 777 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 CCDC175P0C221 793 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 CTAGE8P0CG41 777 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 PDE6AP16499 860 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 SF3B2Q13435 895 aaKnown RBP13.72□□□□□ -0.21
C9orf3-203ENST00000375315 MAP9Q49MG5 647 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 ZMYM1Q5SVZ6 1142 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 CTAGE6Q86UF2 777 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 CTAGE4Q8IX94 777 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 AIDAQ96BJ3 306 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 DENND2AQ9ULE3 1009 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 PCDHA7Q9UN72 937 aa13.72□□□□□ -0.21
C9orf3-203ENST00000375315 CHUKO15111 745 aa13.71□□□□□ -0.21
C9orf3-203ENST00000375315 SHOX2O60902 331 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-203ENST00000375315 NDUFA8P51970 172 aa13.71□□□□□ -0.21
C9orf3-203ENST00000375315 KRT32Q14532 448 aa13.71□□□□□ -0.21
C9orf3-203ENST00000375315 KIF4BQ2VIQ3 1234 aa13.71□□□□□ -0.21
C9orf3-203ENST00000375315 SGSM3Q96HU1 749 aa13.71□□□□□ -0.21
C9orf3-203ENST00000375315 LLPHQ9BRT6 129 aaKnown RBP13.71□□□□□ -0.21
C9orf3-203ENST00000375315 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.21
C9orf3-203ENST00000375315 PRPF6O94906 941 aaKnown RBP13.71□□□□□ -0.21
C9orf3-203ENST00000375315 RRP12Q5JTH9 1297 aaKnown RBP13.71□□□□□ -0.21
C9orf3-203ENST00000375315 CPLX2Q6PUV4 134 aaKnown RBP13.71□□□□□ -0.21
C9orf3-203ENST00000375315 FMNL3Q8IVF7 1028 aa13.71□□□□□ -0.21
C9orf3-203ENST00000375315 FAM76AQ8TAV0 307 aa13.71□□□□□ -0.21
C9orf3-203ENST00000375315 RNF217Q8TC41 542 aa13.71□□□□□ -0.21
C9orf3-203ENST00000375315 FAM84BQ96KN1 310 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-203ENST00000375315 GPHNQ9NQX3 736 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-203ENST00000375315 CAPN7Q9Y6W3 813 aa13.71□□□□□ -0.21
C9orf3-203ENST00000375315 MBD4O95243 580 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 TM4SF1P30408 202 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 IGSF22Q8N9C0 903 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 KIAA0754O94854 1291 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 SYF2O95926 243 aaKnown RBP13.7□□□□□ -0.22
C9orf3-203ENST00000375315 UQCRFS1P1P0C7P4 283 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 CYP7A1P22680 504 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 MCM3P25205 808 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 JMYQ8N9B5 988 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 TMCO5BA8MYB1 307 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 UFL1O94874 794 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 MAP3K12Q12852 859 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 N4BP2L2Q92802 583 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-203ENST00000375315 MCM8Q9UJA3 840 aa13.7□□□□□ -0.22
C9orf3-203ENST00000375315 ZNF804BA4D1E1 1349 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 CTAGE9A4FU28 777 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 TMEM232C9JQI7 657 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 SMIM22K7EJ46 135 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 FGAP02671 866 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 WHAMMP3Q1A5X7 153 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 SLC10A5Q5PT55 438 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 WDR93Q6P2C0 686 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 STOX1Q6ZVD7 989 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 BCAS4Q8TDM0 211 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 SDR42E1Q8WUS8 393 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 DESI2Q9BSY9 194 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 F8W031 263 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-203ENST00000375315 POLRMTO00411 1230 aaKnown RBP13.69□□□□□ -0.22
C9orf3-203ENST00000375315 NEBLO76041 1014 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 GCFC2P16383 781 aaKnown RBP13.69□□□□□ -0.22
C9orf3-203ENST00000375315 HIBADHP31937 336 aaKnown RBP13.69□□□□□ -0.22
C9orf3-203ENST00000375315 IRAK1P51617 712 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 SARNPP82979 210 aaKnown RBP13.69□□□□□ -0.22
C9orf3-203ENST00000375315 STK38Q15208 465 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 TEX11Q8IYF3 940 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 APPBP2Q92624 585 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 HSD3B7Q9H2F3 369 aa13.69□□□□□ -0.22
C9orf3-203ENST00000375315 MINDY4BA8MYZ0 360 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 CHRNA5P30532 468 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 DYNLL1P63167 89 aaKnown RBP13.68□□□□□ -0.22
C9orf3-203ENST00000375315 IRX1P78414 480 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-203ENST00000375315 NEK1Q96PY6 1258 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 LZTFL1Q9NQ48 299 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 MED23Q9ULK4 1368 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 PRDX5P30044 214 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 ADD2P35612 726 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 CCT2P78371 535 aaKnown RBP13.68□□□□□ -0.22
C9orf3-203ENST00000375315 TBX2Q13207 712 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-203ENST00000375315 B4GALNT4Q76KP1 1039 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 AMOTL1Q8IY63 956 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 KCNG4Q8TDN1 519 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 KAT14Q9H8E8 782 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 MRPL44Q9H9J2 332 aaKnown RBP13.68□□□□□ -0.22
C9orf3-203ENST00000375315 HELLSQ9NRZ9 838 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 ZNF202O95125 648 aa13.68□□□□□ -0.22
C9orf3-203ENST00000375315 ADRA2BP18089 450 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms