RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PDE11AQ9HCR9 933 aa12.83□□□□□ -0.36
PTCH1-203ENST00000375274 BTG4Q9NY30 223 aa12.83□□□□□ -0.36
PTCH1-203ENST00000375274 ERVV-2B6SEH9 535 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 BLIDQ8IZY5 108 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 PPARDQ03181 441 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 GOLGA8FQ08AF8 430 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 GOLGA8DPQ0D2H9 430 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 ZBTB38Q8NAP3 1195 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-203ENST00000375274 SDR42E1Q8WUS8 393 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 TFCP2L1Q9NZI6 479 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 PCCAP05165 728 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-203ENST00000375274 TCP1P17987 556 aaKnown RBP12.82□□□□□ -0.36
PTCH1-203ENST00000375274 LACTBP83111 547 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-203ENST00000375274 LONRF2Q1L5Z9 754 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 KRT71Q3SY84 523 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 PEX26Q7Z412 305 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 RSRC1Q96IZ7 334 aaKnown RBP12.82□□□□□ -0.36
PTCH1-203ENST00000375274 ZSCAN10Q96SZ4 725 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-203ENST00000375274 GLT8D2Q9H1C3 349 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 TBC1D7Q9P0N9 293 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 CDK12Q9NYV4 1490 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-203ENST00000375274 PHLPP2Q6ZVD8 1323 aa12.82□□□□□ -0.36
PTCH1-203ENST00000375274 SEC31AO94979 1220 aaKnown RBP12.81□□□□□ -0.36
PTCH1-203ENST00000375274 ADORA1P30542 326 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 RAD51AP2Q09MP3 1159 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 SLC35F6Q8N357 371 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 SYMPKQ92797 1274 aaKnown RBP12.81□□□□□ -0.36
PTCH1-203ENST00000375274 HYOU1Q9Y4L1 999 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 MED23Q9ULK4 1368 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 MYO5CQ9NQX4 1742 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 ADCY7P51828 1080 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 PTPN21Q16825 1174 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 FAM71BQ8TC56 605 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 BCAS4Q8TDM0 211 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 SMC6Q96SB8 1091 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 PLEKHA4Q9H4M7 779 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 ATP5DP30049 168 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 COPB1P53618 953 aaKnown RBP12.81□□□□□ -0.36
PTCH1-203ENST00000375274 PTPN12Q05209 780 aaKnown RBP12.81□□□□□ -0.36
PTCH1-203ENST00000375274 PLCD3Q8N3E9 789 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 GOLGA5Q8TBA6 731 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 EEF2KMTQ96G04 330 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
PTCH1-203ENST00000375274 A0A1B0GUA9 196 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 PRAMEF22A3QJZ6 481 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 CCDC151A5D8V7 595 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 CALUO43852 315 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-203ENST00000375274 PDE8BO95263 885 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 SCG2P13521 617 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 ALDH3A1P30838 453 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 GNGT1P63211 74 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 INTS8Q75QN2 995 aaKnown RBP12.8□□□□□ -0.36
PTCH1-203ENST00000375274 CROCCP2Q86T23 111 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 CSRNP2Q9H175 543 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 FOXP1Q9H334 677 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-203ENST00000375274 ZBTB21Q9ULJ3 1066 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTCH1-203ENST00000375274 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 PHKA1P46020 1223 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 NAA25Q14CX7 972 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 UBL4BQ8N7F7 174 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 SMCO2A6NFE2 343 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 ARID5BQ14865 1188 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 INF2Q27J81 1249 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 FBXO38Q6PIJ6 1188 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 PRR36Q9H6K5 1346 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 CTTNBP2NLQ9P2B4 639 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 E7EVH7 732 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 RPN1P04843 607 aaKnown RBP12.8□□□□□ -0.36
PTCH1-203ENST00000375274 CLCN6P51797 869 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 MTMR3Q13615 1198 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 SARM1Q6SZW1 724 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 STIM2Q9P246 746 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 DNM3Q9UQ16 869 aa12.8□□□□□ -0.36
PTCH1-203ENST00000375274 USP6P35125 1406 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 CIAO1O76071 339 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 ATP1A3P13637 1013 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 CERS3Q8IU89 383 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 SYCE1Q8N0S2 351 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
PTCH1-203ENST00000375274 CCDC87Q9NVE4 849 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 ARPP21Q9UBL0 812 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-203ENST00000375274 VGLL3A8MV65 326 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 GUCY2FP51841 1108 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 NCBP1Q09161 790 aaKnown RBP12.79□□□□□ -0.36
PTCH1-203ENST00000375274 PNMA8AQ86V59 439 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-203ENST00000375274 MAPKAPK5Q8IW41 473 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 PNMA1Q8ND90 353 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 ENOX1Q8TC92 643 aaKnown RBP12.79□□□□□ -0.36
PTCH1-203ENST00000375274 MYO1AQ9UBC5 1043 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 CHMP2AO43633 222 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 UFL1O94874 794 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 BCAMP50895 628 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 ZNF365Q70YC5 407 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 NCAPH2Q6IBW4 605 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 VSTM4Q8IW00 320 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 CEP63Q96MT8 703 aa12.79□□□□□ -0.36
PTCH1-203ENST00000375274 RNF26Q9BY78 433 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms