RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 LRRC37AA6NMS7 1700 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 TRIM75PA6NK02 468 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 UBE2Q2LH0YL09 131 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 PLEKHA8P1O95397 391 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 BTDP43251 543 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 TOB1P50616 345 aaPredicted RBP9.39□□□□□ -0.91
UBR4-202ENST00000375224 GABPB1Q06547 395 aaPredicted RBP9.39□□□□□ -0.91
UBR4-202ENST00000375224 DIXDC1Q155Q3 683 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 KANK3Q6NY19 840 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 FAM177A1Q8N128 213 aaPredicted RBP9.39□□□□□ -0.91
UBR4-202ENST00000375224 MYRIPQ8NFW9 859 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 PIBF1Q8WXW3 757 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 MRFAP1L1Q96HT8 127 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 COA1Q9GZY4 146 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 KCNH3Q9ULD8 1083 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 ATP6V0A2Q9Y487 856 aa9.39□□□□□ -0.91
UBR4-202ENST00000375224 SRPRBQ9Y5M8 271 aaKnown RBP9.39□□□□□ -0.91
UBR4-202ENST00000375224 CNTNAP5Q8WYK1 1306 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 TSPY3P0CV98 308 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 TSPY8P0CW00 308 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 NPR1P16066 1061 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 CALML3P27482 149 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 PDE6BP35913 854 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 MFSD14BQ5SR56 506 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 TEX11Q8IYF3 940 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 TRERF1Q96PN7 1200 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 LZTS2Q9BRK4 669 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 CABP5Q9NP86 173 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 SH3GLB2Q9NR46 395 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 VPS54Q9P1Q0 977 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 SCG2P13521 617 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 NR5A1Q13285 461 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 SPC24Q8NBT2 197 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 CNNM3Q8NE01 707 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 PRIMPOLQ96LW4 560 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 POLLQ9UGP5 575 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 TUBE1Q9UJT0 475 aa9.38□□□□□ -0.91
UBR4-202ENST00000375224 TRAPPC10P48553 1259 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 DHX8Q14562 1220 aaKnown RBP9.37□□□□□ -0.91
UBR4-202ENST00000375224 PFKFB3Q16875 520 aaPredicted RBP9.37□□□□□ -0.91
UBR4-202ENST00000375224 KRBA2Q6ZNG9 492 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 DHX40Q8IX18 779 aaKnown RBP9.37□□□□□ -0.91
UBR4-202ENST00000375224 SRBD1Q8N5C6 995 aaKnown RBP9.37□□□□□ -0.91
UBR4-202ENST00000375224 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 GPR101Q96P66 508 aaPredicted RBP9.37□□□□□ -0.91
UBR4-202ENST00000375224 FBXO2Q9UK22 296 aaPredicted RBP9.37□□□□□ -0.91
UBR4-202ENST00000375224 GAKO14976 1311 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 NEMFO60524 1076 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 RCSD1Q6JBY9 416 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 PROM2Q8N271 834 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 FERMT2Q96AC1 680 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 CLIC6Q96NY7 704 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 FEZ1Q99689 392 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 TTC12Q9H892 705 aaPredicted RBP9.37□□□□□ -0.91
UBR4-202ENST00000375224 CLIP2Q9UDT6 1046 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 MYO1BO43795 1136 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 NMT2O60551 498 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 NLRP5P59047 1200 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 GRM4Q14833 912 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 OLFM4Q6UX06 510 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 MAPKAPK5Q8IW41 473 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 AOPEPQ8N6M6 819 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 OXER1Q8TDS5 423 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 ZC3H12CQ9C0D7 883 aaKnown RBP9.37□□□□□ -0.91
UBR4-202ENST00000375224 PCDHB6Q9Y5E3 794 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 PARP3Q9Y6F1 533 aa9.37□□□□□ -0.91
UBR4-202ENST00000375224 NRXN2Q9P2S2 1712 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 ERICH4A6NGS2 130 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 IKBKBO14920 756 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 GALNT17Q6IS24 598 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 C16orf86Q6ZW13 317 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 MPNDQ8N594 471 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 AKT1S1Q96B36 256 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 NOLC1Q14978 699 aaKnown RBP eCLIP9.36□□□□□ -0.91
UBR4-202ENST00000375224 GRIK5Q16478 980 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 GPATCH11Q8N954 259 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 DYNLL2Q96FJ2 89 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 EYA3Q99504 573 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 PYM1Q9BRP8 204 aaKnown RBP9.36□□□□□ -0.91
UBR4-202ENST00000375224 IL17RBQ9NRM6 502 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 DACH1Q9UI36 760 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 APBA3O96018 575 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 SRGNP10124 158 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 LTBP1Q14766 1721 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 CEP120Q8N960 986 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 CCDC148Q8NFR7 591 aa9.36□□□□□ -0.91
UBR4-202ENST00000375224 CDK5RAP2Q96SN8 1893 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 CDK8P49336 464 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 EVX2Q03828 476 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 DPCR1Q3MIW9 517 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 CCDC186Q7Z3E2 898 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 MASTLQ96GX5 879 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 FLT1P17948 1338 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 G3V3G9 751 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 ATP2B1P20020 1258 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 RASA1P20936 1047 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 GTF2IP78347 998 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 LONRF3Q496Y0 759 aa9.35□□□□□ -0.91
UBR4-202ENST00000375224 TTC38Q5R3I4 469 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms