RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 SCAMP3O14828 347 aaKnown RBP2.99□□□□□ -1.93
CCDC7-204ENST00000375025 CREB3O43889 395 aa2.99□□□□□ -1.93
CCDC7-204ENST00000375025 ADAM11O75078 769 aa2.99□□□□□ -1.93
CCDC7-204ENST00000375025 LMOD1P29536 600 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-204ENST00000375025 CDC27P30260 824 aa2.99□□□□□ -1.93
CCDC7-204ENST00000375025 USP17L24Q0WX57 530 aa2.99□□□□□ -1.93
CCDC7-204ENST00000375025 DPYDQ12882 1025 aa2.99□□□□□ -1.93
CCDC7-204ENST00000375025 TRIP4Q15650 581 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-204ENST00000375025 RNF187Q5TA31 235 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-204ENST00000375025 GDF6Q6KF10 455 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-204ENST00000375025 ACAD11Q709F0 780 aa2.99□□□□□ -1.93
CCDC7-204ENST00000375025 TREML1Q86YW5 311 aa2.99□□□□□ -1.93
CCDC7-204ENST00000375025 CCDC136Q96JN2 1154 aa2.99□□□□□ -1.93
CCDC7-204ENST00000375025 TANGO6Q9C0B7 1094 aa2.99□□□□□ -1.93
CCDC7-204ENST00000375025 RPGRIP1LQ68CZ1 1315 aa2.99□□□□□ -1.93
CCDC7-204ENST00000375025 ZNF644Q9H582 1327 aaPredicted RBP2.99□□□□□ -1.93
CCDC7-204ENST00000375025 BTAF1O14981 1849 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 ANKRD33BA6NCL7 494 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 FSCN2O14926 492 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 C8AP07357 584 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 VEGFAP15692 232 aaPredicted RBP2.98□□□□□ -1.93
CCDC7-204ENST00000375025 MAP2K2P36507 400 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 HTRA3P83110 453 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 ZNF827Q17R98 1081 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 LARP1Q6PKG0 1096 aaKnown RBP2.98□□□□□ -1.93
CCDC7-204ENST00000375025 PIK3R5Q8WYR1 880 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.98□□□□□ -1.93
CCDC7-204ENST00000375025 SAGE1Q9NXZ1 904 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 PIM2Q9P1W9 311 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 IGSF1Q8N6C5 1336 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 LIG1P18858 919 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 PKN2Q16513 984 aaKnown RBP2.98□□□□□ -1.93
CCDC7-204ENST00000375025 NOM1Q5C9Z4 860 aaKnown RBP2.98□□□□□ -1.93
CCDC7-204ENST00000375025 FBXO33Q7Z6M2 555 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 NME8Q8N427 588 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 SPACA7Q96KW9 195 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 KLHL42Q9P2K6 505 aa2.98□□□□□ -1.93
CCDC7-204ENST00000375025 KIF1BO60333 1816 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 SBF1O95248 1867 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 CARNS1A5YM72 827 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 LINC01387J3KSC0 135 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 FOSL1P15407 271 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 ATP2B1P20020 1258 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 HSD3B2P26439 372 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 HOXA10P31260 410 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-204ENST00000375025 HYAL2Q12891 473 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 COX20Q5RI15 118 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 WDR78Q5VTH9 848 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 VSIG10LQ86VR7 867 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 CEP120Q8N960 986 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 ASIC4Q96FT7 647 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 GPATCH3Q96I76 525 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 FBXL18Q96ME1 805 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 NSUN5Q96P11 429 aaKnown RBP2.97□□□□□ -1.93
CCDC7-204ENST00000375025 KRTAP4-5Q9BYR2 181 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 FAN1Q9Y2M0 1017 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 TIAF1O95411 115 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 MAP4K4O95819 1239 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-204ENST00000375025 PREPP48147 710 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 ETFBKMTQ8IXQ9 262 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 PBX4Q9BYU1 374 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 SUGCTQ9HAC7 445 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 BSDC1Q9NW68 430 aaPredicted RBP2.97□□□□□ -1.93
CCDC7-204ENST00000375025 CHPF2Q9P2E5 772 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 TFIP11Q9UBB9 837 aaKnown RBP2.97□□□□□ -1.93
CCDC7-204ENST00000375025 CCDC39Q9UFE4 941 aa2.97□□□□□ -1.93
CCDC7-204ENST00000375025 SCN4AP35499 1836 aa2.96□□□□□ -1.93
CCDC7-204ENST00000375025 ZNF831Q5JPB2 1677 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 EXOC5O00471 708 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 TNFRSF10BO14763 440 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 U2SURPO15042 1029 aaKnown RBP2.96□□□□□ -1.94
CCDC7-204ENST00000375025 SH3BP5O60239 455 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 PPFIA4O75335 1185 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 PARNO95453 639 aaKnown RBP2.96□□□□□ -1.94
CCDC7-204ENST00000375025 HSP90AA1P07900 732 aaKnown RBP2.96□□□□□ -1.94
CCDC7-204ENST00000375025 ATP11AP98196 1134 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 FAM50AQ14320 339 aaKnown RBP2.96□□□□□ -1.94
CCDC7-204ENST00000375025 C4orf46Q504U0 113 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 BEND4Q6ZU67 534 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 SMG8Q8ND04 991 aaKnown RBP2.96□□□□□ -1.94
CCDC7-204ENST00000375025 UBASH3BQ8TF42 649 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 RELTQ969Z4 430 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 SGSM3Q96HU1 749 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 SENP7Q9BQF6 1050 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 MAF1Q9H063 256 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 RNF208Q9H0X6 261 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 GLTPD2A6NH11 291 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 H3BRJ5 948 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 SMNDC1O75940 238 aaKnown RBP eCLIP2.96□□□□□ -1.94
CCDC7-204ENST00000375025 EPHA1P21709 976 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 CALRP27797 417 aaKnown RBP2.96□□□□□ -1.94
CCDC7-204ENST00000375025 ECE1P42892 770 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 XPCQ01831 940 aaPredicted RBP2.96□□□□□ -1.94
CCDC7-204ENST00000375025 GNL2Q13823 731 aaKnown RBP2.96□□□□□ -1.94
CCDC7-204ENST00000375025 DUOXA2Q1HG44 320 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 CCDC144BQ3MJ40 725 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 HINFPQ9BQA5 517 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 PRO3102Q9H379 93 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 SEC31BQ9NQW1 1179 aa2.96□□□□□ -1.94
CCDC7-204ENST00000375025 EGFL7Q9UHF1 273 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms