RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 RAB3GAP1Q15042 981 aa20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 USP48Q86UV5 1035 aa20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 CCDC144CPQ8IYA2 1237 aa20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 SCYL3Q8IZE3 742 aa20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 GMCL1P1Q8NEA9 526 aa20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 CTCFLQ8NI51 663 aaPredicted RBP20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 GLIS2Q9BZE0 524 aaPredicted RBP20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 NMRK2Q9NPI5 230 aa20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 CLIP2Q9UDT6 1046 aa20.07■□□□□ 0.8
HLA-DMA-201ENST00000374843 CPLX1O14810 134 aa20.06■□□□□ 0.8
HLA-DMA-201ENST00000374843 POTEIP0CG38 1075 aa20.06■□□□□ 0.8
HLA-DMA-201ENST00000374843 POTEJP0CG39 1038 aa20.06■□□□□ 0.8
HLA-DMA-201ENST00000374843 PDHBP11177 359 aa20.06■□□□□ 0.8
HLA-DMA-201ENST00000374843 GJB2P29033 226 aa20.06■□□□□ 0.8
HLA-DMA-201ENST00000374843 WRNIP1Q96S55 665 aa20.06■□□□□ 0.8
HLA-DMA-201ENST00000374843 ARHGEF10LQ9HCE6 1279 aa20.06■□□□□ 0.8
HLA-DMA-201ENST00000374843 PALM3A6NDB9 673 aaPredicted RBP20.05■□□□□ 0.8
HLA-DMA-201ENST00000374843 INPP5BP32019 993 aa20.05■□□□□ 0.8
HLA-DMA-201ENST00000374843 GNAQP50148 359 aa20.05■□□□□ 0.8
HLA-DMA-201ENST00000374843 ASPRV1Q53RT3 343 aa20.05■□□□□ 0.8
HLA-DMA-201ENST00000374843 NBPF11Q86T75 865 aa20.05■□□□□ 0.8
HLA-DMA-201ENST00000374843 SH2D4AQ9H788 454 aa20.05■□□□□ 0.8
HLA-DMA-201ENST00000374843 MAD2L2Q9UI95 211 aa20.05■□□□□ 0.8
HLA-DMA-201ENST00000374843 TMX2Q9Y320 296 aa20.05■□□□□ 0.8
HLA-DMA-201ENST00000374843 CNTNAP5Q8WYK1 1306 aa20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 USP2O75604 605 aaPredicted RBP20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 PLEKHA8P1O95397 391 aa20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 NF2P35240 595 aa20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 MAP3K11Q16584 847 aa20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 DLK2Q6UY11 383 aa20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 DCAF4Q8WV16 495 aa20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 GMCL1Q96IK5 515 aa20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 LZTS2Q9BRK4 669 aa20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 CHMP5Q9NZZ3 219 aa20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 KIF3AQ9Y496 699 aa20.04■□□□□ 0.8
HLA-DMA-201ENST00000374843 A0A1W2PRG0 241 aa20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 PPP1R12BO60237 982 aaPredicted RBP20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 FMNL1O95466 1100 aaPredicted RBP20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 PARP1P09874 1014 aaKnown RBP20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 PDIA4P13667 645 aaKnown RBP20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 FDPSP14324 419 aaKnown RBP20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 ATP2B2Q01814 1243 aa20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 ZNF543Q08ER8 600 aa20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 RGS22Q8NE09 1264 aa20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 WDR18Q9BV38 432 aa20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 RNF26Q9BY78 433 aaPredicted RBP20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 CLEC11AQ9Y240 323 aa20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 PHIPQ8WWQ0 1821 aa20.03■□□□□ 0.8
HLA-DMA-201ENST00000374843 USP17L5A8MUK1 530 aa20.02■□□□□ 0.8
HLA-DMA-201ENST00000374843 PDCP20941 246 aa20.02■□□□□ 0.8
HLA-DMA-201ENST00000374843 SMARCA1P28370 1054 aa20.02■□□□□ 0.8
HLA-DMA-201ENST00000374843 MAP1SQ66K74 1059 aaPredicted RBP20.02■□□□□ 0.8
HLA-DMA-201ENST00000374843 RASGRP2Q7LDG7 609 aa20.02■□□□□ 0.8
HLA-DMA-201ENST00000374843 ACER1Q8TDN7 264 aa20.02■□□□□ 0.8
HLA-DMA-201ENST00000374843 SPZ1Q9BXG8 430 aa20.02■□□□□ 0.8
HLA-DMA-201ENST00000374843 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.02■□□□□ 0.8
HLA-DMA-201ENST00000374843 ORC3Q9UBD5 711 aaPredicted RBP20.02■□□□□ 0.8
HLA-DMA-201ENST00000374843 NDUFB10O96000 172 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 PTPRAP18433 802 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 ECE1P42892 770 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 IREB2P48200 963 aaKnown RBP20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 MAP3K9P80192 1104 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 GPATCH4Q5T3I0 446 aaKnown RBP20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 SLFN13Q68D06 897 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 STAG2Q8N3U4 1231 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 SRBD1Q8N5C6 995 aaKnown RBP20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 DDX11Q96FC9 970 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 KIAA1683Q9H0B3 1180 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 GOPCQ9HD26 462 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 PICK1Q9NRD5 415 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 RBM27Q9P2N5 1060 aaKnown RBP20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 SNCAIPQ9Y6H5 919 aa20.01■□□□□ 0.79
HLA-DMA-201ENST00000374843 F5H6K3 240 aa20■□□□□ 0.79
HLA-DMA-201ENST00000374843 NUCB2P80303 420 aa20■□□□□ 0.79
HLA-DMA-201ENST00000374843 KLRC3Q07444 240 aa20■□□□□ 0.79
HLA-DMA-201ENST00000374843 SSRP1Q08945 709 aaKnown RBP20■□□□□ 0.79
HLA-DMA-201ENST00000374843 VGLL4Q14135 290 aa20■□□□□ 0.79
HLA-DMA-201ENST00000374843 SLC35G1Q2M3R5 365 aa20■□□□□ 0.79
HLA-DMA-201ENST00000374843 USP17L2Q6R6M4 530 aa20■□□□□ 0.79
HLA-DMA-201ENST00000374843 TRIM22Q8IYM9 498 aa20■□□□□ 0.79
HLA-DMA-201ENST00000374843 PHKBQ93100 1093 aa20■□□□□ 0.79
HLA-DMA-201ENST00000374843 ZKSCAN4Q969J2 545 aaPredicted RBP20■□□□□ 0.79
HLA-DMA-201ENST00000374843 VCPKMTQ9H867 229 aa20■□□□□ 0.79
HLA-DMA-201ENST00000374843 FZD1Q9UP38 647 aa20■□□□□ 0.79
HLA-DMA-201ENST00000374843 UNCXA6NJT0 531 aa19.99■□□□□ 0.79
HLA-DMA-201ENST00000374843 PRPF3O43395 683 aaKnown RBP19.99■□□□□ 0.79
HLA-DMA-201ENST00000374843 DEXIO95424 95 aa19.99■□□□□ 0.79
HLA-DMA-201ENST00000374843 SYT1P21579 422 aa19.99■□□□□ 0.79
HLA-DMA-201ENST00000374843 FAM184AQ8NB25 1140 aa19.99■□□□□ 0.79
HLA-DMA-201ENST00000374843 SLC26A6Q9BXS9 759 aa19.99■□□□□ 0.79
HLA-DMA-201ENST00000374843 AS3MTQ9HBK9 375 aa19.99■□□□□ 0.79
HLA-DMA-201ENST00000374843 KLRF2D3W0D1 207 aa19.98■□□□□ 0.79
HLA-DMA-201ENST00000374843 TRAF5O00463 557 aa19.98■□□□□ 0.79
HLA-DMA-201ENST00000374843 DTNBO60941 627 aa19.98■□□□□ 0.79
HLA-DMA-201ENST00000374843 BRD1O95696 1058 aa19.98■□□□□ 0.79
HLA-DMA-201ENST00000374843 FKBP1BP68106 108 aa19.98■□□□□ 0.79
HLA-DMA-201ENST00000374843 CHADLQ6NUI6 762 aa19.98■□□□□ 0.79
HLA-DMA-201ENST00000374843 CCDC84Q86UT8 332 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms