RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 FAM43AQ8N2R8 423 aa17.68■□□□□ 0.42
HSPG2-201ENST00000374673 NEK1Q96PY6 1258 aa17.68■□□□□ 0.42
HSPG2-201ENST00000374673 ZSCAN10Q96SZ4 725 aaPredicted RBP17.68■□□□□ 0.42
HSPG2-201ENST00000374673 ZKSCAN3Q9BRR0 538 aa17.68■□□□□ 0.42
HSPG2-201ENST00000374673 MTA3Q9BTC8 594 aa17.68■□□□□ 0.42
HSPG2-201ENST00000374673 AGTPBP1Q9UPW5 1226 aa17.68■□□□□ 0.42
HSPG2-201ENST00000374673 SLC45A1Q9Y2W3 748 aa17.68■□□□□ 0.42
HSPG2-201ENST00000374673 TNKSO95271 1327 aa17.68■□□□□ 0.42
HSPG2-201ENST00000374673 PARP14Q460N5 1801 aa17.68■□□□□ 0.42
HSPG2-201ENST00000374673 ALDH1A1P00352 501 aa17.67■□□□□ 0.42
HSPG2-201ENST00000374673 ANTXR2P58335 489 aa17.67■□□□□ 0.42
HSPG2-201ENST00000374673 GMCL1P1Q8NEA9 526 aa17.67■□□□□ 0.42
HSPG2-201ENST00000374673 ANKS1AQ92625 1134 aa17.67■□□□□ 0.42
HSPG2-201ENST00000374673 LPAR1Q92633 364 aa17.67■□□□□ 0.42
HSPG2-201ENST00000374673 UBAC1Q9BSL1 405 aa17.67■□□□□ 0.42
HSPG2-201ENST00000374673 GOPCQ9HD26 462 aa17.67■□□□□ 0.42
HSPG2-201ENST00000374673 TOP1P11387 765 aaKnown RBP17.66■□□□□ 0.42
HSPG2-201ENST00000374673 VCAM1P19320 739 aa17.66■□□□□ 0.42
HSPG2-201ENST00000374673 MCM5P33992 734 aa17.66■□□□□ 0.42
HSPG2-201ENST00000374673 SEC23AQ15436 765 aa17.66■□□□□ 0.42
HSPG2-201ENST00000374673 TREML2Q5T2D2 321 aa17.66■□□□□ 0.42
HSPG2-201ENST00000374673 LRRC47Q8N1G4 583 aaKnown RBP17.66■□□□□ 0.42
HSPG2-201ENST00000374673 ENAHQ8N8S7 591 aaPredicted RBP17.66■□□□□ 0.42
HSPG2-201ENST00000374673 TMEM47Q9BQJ4 181 aa17.66■□□□□ 0.42
HSPG2-201ENST00000374673 WDR19Q8NEZ3 1342 aa17.66■□□□□ 0.42
HSPG2-201ENST00000374673 F5H6K3 240 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 PDHXO00330 501 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 WDR46O15213 610 aaKnown RBP17.65■□□□□ 0.42
HSPG2-201ENST00000374673 HMGB1P09429 215 aaKnown RBP17.65■□□□□ 0.42
HSPG2-201ENST00000374673 PSMA5P28066 241 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 HOXA7P31268 230 aaPredicted RBP17.65■□□□□ 0.42
HSPG2-201ENST00000374673 ANAPC15P60006 121 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 KLRC3Q07444 240 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 PABPC4Q13310 644 aaKnown RBP eCLIP17.65■□□□□ 0.42
HSPG2-201ENST00000374673 COL9A3Q14050 684 aaPredicted RBP17.65■□□□□ 0.42
HSPG2-201ENST00000374673 SART3Q15020 963 aaKnown RBP17.65■□□□□ 0.42
HSPG2-201ENST00000374673 KIAA1755Q5JYT7 1200 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 IL17RAQ96F46 866 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 TMEM87BQ96K49 555 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 CFHR5Q9BXR6 569 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 WBP1LQ9NX94 342 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 RNF186Q9NXI6 227 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 SAGE1Q9NXZ1 904 aa17.65■□□□□ 0.42
HSPG2-201ENST00000374673 RLFQ13129 1914 aa17.64■□□□□ 0.42
HSPG2-201ENST00000374673 ERICH2A1L162 156 aa17.64■□□□□ 0.41
HSPG2-201ENST00000374673 IFIT3O14879 490 aaKnown RBP17.64■□□□□ 0.41
HSPG2-201ENST00000374673 PRC1O43663 620 aa17.64■□□□□ 0.41
HSPG2-201ENST00000374673 NDUFB10O96000 172 aa17.64■□□□□ 0.41
HSPG2-201ENST00000374673 DHX32Q7L7V1 743 aaKnown RBP17.64■□□□□ 0.41
HSPG2-201ENST00000374673 CHST3Q7LGC8 479 aa17.64■□□□□ 0.41
HSPG2-201ENST00000374673 JAKMIP1Q96N16 626 aaKnown RBP17.64■□□□□ 0.41
HSPG2-201ENST00000374673 USP17L15C9J2P7 530 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 USP17L13C9JLJ4 530 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 USP17L11C9JVI0 530 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 USP17L18D6R9N7 530 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 USP17L22D6RA61 530 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 USP17L17D6RBQ6 530 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 USP17L19D6RCP7 530 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 USP17L20D6RJB6 530 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 CA12O43570 354 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 EXOSC10Q01780 885 aaKnown RBP17.63■□□□□ 0.41
HSPG2-201ENST00000374673 USP17L24Q0WX57 530 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 WTAPQ15007 396 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 TAF1CQ15572 869 aaPredicted RBP17.63■□□□□ 0.41
HSPG2-201ENST00000374673 IFIT1BQ5T764 474 aaKnown RBP17.63■□□□□ 0.41
HSPG2-201ENST00000374673 SPICE1Q8N0Z3 855 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 IGDCC4Q8TDY8 1250 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 BEGAINQ9BUH8 593 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 BACH2Q9BYV9 841 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 TM6SF1Q9BZW5 370 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 RPAP3Q9H6T3 665 aaPredicted RBP17.63■□□□□ 0.41
HSPG2-201ENST00000374673 PNMA3Q9UL41 463 aa17.63■□□□□ 0.41
HSPG2-201ENST00000374673 SH2B2O14492 632 aaPredicted RBP17.62■□□□□ 0.41
HSPG2-201ENST00000374673 OSBPP22059 807 aa17.62■□□□□ 0.41
HSPG2-201ENST00000374673 TMEM67Q5HYA8 995 aa17.62■□□□□ 0.41
HSPG2-201ENST00000374673 SLFN13Q68D06 897 aa17.62■□□□□ 0.41
HSPG2-201ENST00000374673 BLOC1S2Q6QNY1 142 aa17.62■□□□□ 0.41
HSPG2-201ENST00000374673 CATSPERGQ6ZRH7 1159 aa17.62■□□□□ 0.41
HSPG2-201ENST00000374673 PNMA1Q8ND90 353 aa17.62■□□□□ 0.41
HSPG2-201ENST00000374673 GMCL1Q96IK5 515 aa17.62■□□□□ 0.41
HSPG2-201ENST00000374673 PARK7Q99497 189 aaKnown RBP17.62■□□□□ 0.41
HSPG2-201ENST00000374673 KAT14Q9H8E8 782 aa17.62■□□□□ 0.41
HSPG2-201ENST00000374673 A0A0G2JMZ2 1700 aa17.61■□□□□ 0.41
HSPG2-201ENST00000374673 RAD21O60216 631 aa17.61■□□□□ 0.41
HSPG2-201ENST00000374673 TRPA1O75762 1119 aa17.61■□□□□ 0.41
HSPG2-201ENST00000374673 CASTP20810 708 aaKnown RBP17.61■□□□□ 0.41
HSPG2-201ENST00000374673 LIFRP42702 1097 aa17.61■□□□□ 0.41
HSPG2-201ENST00000374673 ASCC2Q9H1I8 757 aaPredicted RBP17.61■□□□□ 0.41
HSPG2-201ENST00000374673 LY9Q9HBG7 655 aa17.61■□□□□ 0.41
HSPG2-201ENST00000374673 ZFYVE28Q9HCC9 887 aa17.61■□□□□ 0.41
HSPG2-201ENST00000374673 ZSWIM6Q9HCJ5 1215 aa17.61■□□□□ 0.41
HSPG2-201ENST00000374673 SNHG28P0DPA3 235 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 CYP2C8P10632 490 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 PDHBP11177 359 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 BMP3P12645 472 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 RPS6KB1P23443 525 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 SLC1A4P43007 532 aa17.6■□□□□ 0.41
HSPG2-201ENST00000374673 RBM25P49756 843 aaKnown RBP17.6■□□□□ 0.41
HSPG2-201ENST00000374673 IRX3P78415 501 aaPredicted RBP17.6■□□□□ 0.41
HSPG2-201ENST00000374673 CRHR2Q13324 411 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms