RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 TREML2Q5T2D2 321 aa17.91■□□□□ 0.46
PFDN6-203ENST00000374610 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
PFDN6-203ENST00000374610 SMCR8Q8TEV9 937 aaPredicted RBP17.91■□□□□ 0.46
PFDN6-203ENST00000374610 TTC14Q96N46 770 aa17.91■□□□□ 0.46
PFDN6-203ENST00000374610 NEK1Q96PY6 1258 aa17.91■□□□□ 0.46
PFDN6-203ENST00000374610 PARK7Q99497 189 aaKnown RBP17.91■□□□□ 0.46
PFDN6-203ENST00000374610 TANGO6Q9C0B7 1094 aa17.91■□□□□ 0.46
PFDN6-203ENST00000374610 KAT14Q9H8E8 782 aa17.91■□□□□ 0.46
PFDN6-203ENST00000374610 UPF2Q9HAU5 1272 aaKnown RBP17.91■□□□□ 0.46
PFDN6-203ENST00000374610 ZCCHC17Q9NP64 241 aaKnown RBP17.91■□□□□ 0.46
PFDN6-203ENST00000374610 IL17RBQ9NRM6 502 aa17.91■□□□□ 0.46
PFDN6-203ENST00000374610 WBP1LQ9NX94 342 aa17.91■□□□□ 0.46
PFDN6-203ENST00000374610 USP17L15C9J2P7 530 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 USP17L13C9JLJ4 530 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 USP17L11C9JVI0 530 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 USP17L18D6R9N7 530 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 USP17L22D6RA61 530 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 USP17L17D6RBQ6 530 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 USP17L19D6RCP7 530 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 USP17L20D6RJB6 530 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 HSPA1AP0DMV8 641 aaKnown RBP17.9■□□□□ 0.46
PFDN6-203ENST00000374610 HSPA1BP0DMV9 641 aaKnown RBP17.9■□□□□ 0.46
PFDN6-203ENST00000374610 TOP1P11387 765 aaKnown RBP17.9■□□□□ 0.46
PFDN6-203ENST00000374610 PSMA5P28066 241 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 MCM5P33992 734 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 FGD1P98174 961 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 USP17L24Q0WX57 530 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 IFIT1BQ5T764 474 aaKnown RBP17.9■□□□□ 0.46
PFDN6-203ENST00000374610 CHST3Q7LGC8 479 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 SIAH1Q8IUQ4 282 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 CHMP4CQ96CF2 233 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 RPAP3Q9H6T3 665 aaPredicted RBP17.9■□□□□ 0.46
PFDN6-203ENST00000374610 SAGE1Q9NXZ1 904 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 SLC45A1Q9Y2W3 748 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 TAF6LQ9Y6J9 622 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 TNKSO95271 1327 aa17.9■□□□□ 0.46
PFDN6-203ENST00000374610 F5H6K3 240 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 TBC1D8O95759 1140 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 HMGB1P09429 215 aaKnown RBP17.89■□□□□ 0.45
PFDN6-203ENST00000374610 VCAM1P19320 739 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 KLRC3Q07444 240 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 GPAT2Q6NUI2 795 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 STOX1Q6ZVD7 989 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 CYB5R4Q7L1T6 521 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 DGKHQ86XP1 1220 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 MKL1Q969V6 931 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 C12orf42Q96LP6 360 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 JAKMIP1Q96N16 626 aaKnown RBP17.89■□□□□ 0.45
PFDN6-203ENST00000374610 SYNPO2Q9UMS6 1093 aa17.89■□□□□ 0.45
PFDN6-203ENST00000374610 WDR46O15213 610 aaKnown RBP17.88■□□□□ 0.45
PFDN6-203ENST00000374610 PRC1O43663 620 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 IKQ13123 557 aaPredicted RBP17.88■□□□□ 0.45
PFDN6-203ENST00000374610 MOGSQ13724 837 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 WTAPQ15007 396 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 C8orf34Q49A92 452 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 TMEM67Q5HYA8 995 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 SLFN13Q68D06 897 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 NFXL1Q6ZNB6 911 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 RASEFQ8IZ41 740 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 TMEM47Q9BQJ4 181 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 TSKSQ9UJT2 592 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 SNX14Q9Y5W7 946 aa17.88■□□□□ 0.45
PFDN6-203ENST00000374610 CYP2C8P10632 490 aa17.87■□□□□ 0.45
PFDN6-203ENST00000374610 SLC1A4P43007 532 aa17.87■□□□□ 0.45
PFDN6-203ENST00000374610 CRHR2Q13324 411 aa17.87■□□□□ 0.45
PFDN6-203ENST00000374610 CCDC96Q2M329 555 aa17.87■□□□□ 0.45
PFDN6-203ENST00000374610 TSGA10IPQ3SY00 556 aa17.87■□□□□ 0.45
PFDN6-203ENST00000374610 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
PFDN6-203ENST00000374610 GMCL1P1Q8NEA9 526 aa17.87■□□□□ 0.45
PFDN6-203ENST00000374610 ASCC2Q9H1I8 757 aaPredicted RBP17.87■□□□□ 0.45
PFDN6-203ENST00000374610 CTDP1Q9Y5B0 961 aaPredicted RBP17.87■□□□□ 0.45
PFDN6-203ENST00000374610 GREB1LQ9C091 1923 aaPredicted RBP17.87■□□□□ 0.45
PFDN6-203ENST00000374610 MYH4Q9Y623 1939 aa17.87■□□□□ 0.45
PFDN6-203ENST00000374610 FLOT1O75955 427 aa17.86■□□□□ 0.45
PFDN6-203ENST00000374610 NDUFB10O96000 172 aa17.86■□□□□ 0.45
PFDN6-203ENST00000374610 HOXA7P31268 230 aaPredicted RBP17.86■□□□□ 0.45
PFDN6-203ENST00000374610 CTCFP49711 727 aaPredicted RBP17.86■□□□□ 0.45
PFDN6-203ENST00000374610 FAM83BQ5T0W9 1011 aa17.86■□□□□ 0.45
PFDN6-203ENST00000374610 MB21D2Q8IYB1 491 aaPredicted RBP17.86■□□□□ 0.45
PFDN6-203ENST00000374610 ENAHQ8N8S7 591 aaPredicted RBP17.86■□□□□ 0.45
PFDN6-203ENST00000374610 TMEM87BQ96K49 555 aa17.86■□□□□ 0.45
PFDN6-203ENST00000374610 PTPRFP10586 1907 aa17.86■□□□□ 0.45
PFDN6-203ENST00000374610 CCDC69A6NI79 296 aa17.85■□□□□ 0.45
PFDN6-203ENST00000374610 LOC285556D6RIA3 1793 aa17.85■□□□□ 0.45
PFDN6-203ENST00000374610 SEC24BO95487 1268 aa17.85■□□□□ 0.45
PFDN6-203ENST00000374610 BMP3P12645 472 aa17.85■□□□□ 0.45
PFDN6-203ENST00000374610 CASTP20810 708 aaKnown RBP17.85■□□□□ 0.45
PFDN6-203ENST00000374610 ADCK5Q3MIX3 580 aa17.85■□□□□ 0.45
PFDN6-203ENST00000374610 CATSPERGQ6ZRH7 1159 aa17.85■□□□□ 0.45
PFDN6-203ENST00000374610 DHX32Q7L7V1 743 aaKnown RBP17.85■□□□□ 0.45
PFDN6-203ENST00000374610 TMTC2Q8N394 836 aa17.85■□□□□ 0.45
PFDN6-203ENST00000374610 PNMA1Q8ND90 353 aa17.85■□□□□ 0.45
PFDN6-203ENST00000374610 NKX2-3Q8TAU0 364 aa17.85■□□□□ 0.45
PFDN6-203ENST00000374610 NUP88Q99567 741 aaPredicted RBP17.85■□□□□ 0.45
PFDN6-203ENST00000374610 HOXC10Q9NYD6 342 aa17.85■□□□□ 0.45
PFDN6-203ENST00000374610 FOXN1O15353 648 aa17.84■□□□□ 0.45
PFDN6-203ENST00000374610 TLR2O60603 784 aa17.84■□□□□ 0.45
PFDN6-203ENST00000374610 COG2Q14746 738 aa17.84■□□□□ 0.45
PFDN6-203ENST00000374610 KIAA1755Q5JYT7 1200 aa17.84■□□□□ 0.45
PFDN6-203ENST00000374610 SYNE3Q6ZMZ3 975 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms