RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 ZKSCAN3Q9BRR0 538 aa11.68□□□□□ -0.54
PDZD11-202ENST00000374454 VCPKMTQ9H867 229 aa11.68□□□□□ -0.54
PDZD11-202ENST00000374454 EMILIN3Q9NT22 766 aa11.68□□□□□ -0.54
PDZD11-202ENST00000374454 TMOD4Q9NZQ9 345 aa11.68□□□□□ -0.54
PDZD11-202ENST00000374454 GREB1LQ9C091 1923 aaPredicted RBP11.68□□□□□ -0.54
PDZD11-202ENST00000374454 CEP350Q5VT06 3117 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 TNKSO95271 1327 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 ERICH2A1L162 156 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 F5H6K3 240 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 IFIT3O14879 490 aaKnown RBP11.67□□□□□ -0.54
PDZD11-202ENST00000374454 RPS6KB1P23443 525 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 LIFRP42702 1097 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 HMGCS2P54868 508 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 ATP2B2Q01814 1243 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 KLRC3Q07444 240 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 MKRN3Q13064 507 aaKnown RBP11.67□□□□□ -0.54
PDZD11-202ENST00000374454 COL9A3Q14050 684 aaPredicted RBP11.67□□□□□ -0.54
PDZD11-202ENST00000374454 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 BRI3BPQ8WY22 251 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 LPAR1Q92633 364 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
PDZD11-202ENST00000374454 ZCCHC17Q9NP64 241 aaKnown RBP11.67□□□□□ -0.54
PDZD11-202ENST00000374454 MYH8P13535 1937 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 PHIPQ8WWQ0 1821 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 ATAD5Q96QE3 1844 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 CCL15-CCL14A0A0B4J2E2 113 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 AOC2O75106 756 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 CASTP20810 708 aaKnown RBP11.66□□□□□ -0.54
PDZD11-202ENST00000374454 GRM1Q13255 1194 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 WTAPQ15007 396 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 CCL15Q16663 113 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 TMEM67Q5HYA8 995 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 IFIT1BQ5T764 474 aaKnown RBP11.66□□□□□ -0.54
PDZD11-202ENST00000374454 OTUD7BQ6GQQ9 843 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 GPAT2Q6NUI2 795 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 RUFY3Q7L099 469 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 CHST3Q7LGC8 479 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 ANKRD23Q86SG2 305 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 TBC1D32Q96NH3 1257 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 ZIC5Q96T25 663 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 PTPN18Q99952 460 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 LY9Q9HBG7 655 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 AGTPBP1Q9UPW5 1226 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 SLC45A1Q9Y2W3 748 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 CYP46A1Q9Y6A2 500 aa11.66□□□□□ -0.54
PDZD11-202ENST00000374454 SH2B2O14492 632 aaPredicted RBP11.65□□□□□ -0.54
PDZD11-202ENST00000374454 WDR46O15213 610 aaKnown RBP11.65□□□□□ -0.54
PDZD11-202ENST00000374454 NDUFB10O96000 172 aa11.65□□□□□ -0.54
PDZD11-202ENST00000374454 HOXA7P31268 230 aaPredicted RBP11.65□□□□□ -0.54
PDZD11-202ENST00000374454 PABPC4Q13310 644 aaKnown RBP eCLIP11.65□□□□□ -0.541e-6■■■■■ 27.3
PDZD11-202ENST00000374454 SLFN13Q68D06 897 aa11.65□□□□□ -0.54
PDZD11-202ENST00000374454 SGMS1Q86VZ5 419 aa11.65□□□□□ -0.54
PDZD11-202ENST00000374454 IFNL1Q8IU54 200 aa11.65□□□□□ -0.54
PDZD11-202ENST00000374454 LRRC47Q8N1G4 583 aaKnown RBP11.65□□□□□ -0.54
PDZD11-202ENST00000374454 GMCL1Q96IK5 515 aa11.65□□□□□ -0.54
PDZD11-202ENST00000374454 KIF2CQ99661 725 aa11.65□□□□□ -0.54
PDZD11-202ENST00000374454 AGXT2Q9BYV1 514 aa11.65□□□□□ -0.54
PDZD11-202ENST00000374454 ALDH8A1Q9H2A2 487 aaPredicted RBP11.65□□□□□ -0.54
PDZD11-202ENST00000374454 KAT14Q9H8E8 782 aa11.65□□□□□ -0.54
PDZD11-202ENST00000374454 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 BTBD19C9JJ37 291 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 ALDH1A1P00352 501 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 SNHG28P0DPA3 235 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 CPA1P15085 419 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 VCAM1P19320 739 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
PDZD11-202ENST00000374454 KIAA1755Q5JYT7 1200 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 GADL1Q6ZQY3 521 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 PNMA1Q8ND90 353 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 DCAF4Q8WV16 495 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 MAP3K14Q99558 947 aa11.64□□□□□ -0.55
PDZD11-202ENST00000374454 IGF2BP3O00425 579 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDZD11-202ENST00000374454 PLA2G6O60733 806 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 BMP3P12645 472 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 EVCP57679 992 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 MAP2K1Q02750 393 aaPredicted RBP11.63□□□□□ -0.55
PDZD11-202ENST00000374454 TROAPQ12815 778 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 DGKZQ13574 1117 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 TREML2Q5T2D2 321 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 CATSPERGQ6ZRH7 1159 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 Q6ZUG5 572 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 CATIPQ7Z7H3 387 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 SPICE1Q8N0Z3 855 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 FAM43AQ8N2R8 423 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 TCEANC2Q96MN5 208 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 LRRC2Q9BYS8 371 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 UPF3BQ9BZI7 483 aaKnown RBP11.63□□□□□ -0.55
PDZD11-202ENST00000374454 RPAP3Q9H6T3 665 aaPredicted RBP11.63□□□□□ -0.55
PDZD11-202ENST00000374454 SENP2Q9HC62 589 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 GPHNQ9NQX3 736 aaPredicted RBP11.63□□□□□ -0.55
PDZD11-202ENST00000374454 PDRG1Q9NUG6 133 aa11.63□□□□□ -0.55
PDZD11-202ENST00000374454 PNMA3Q9UL41 463 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms