RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 TMX3Q96JJ7 454 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 LARP6Q9BRS8 491 aaKnown RBP10.67□□□□□ -0.7
PTPN20-201ENST00000374218 RBM28Q9NW13 759 aaKnown RBP10.67□□□□□ -0.7
PTPN20-201ENST00000374218 FZD1Q9UP38 647 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 TMX2Q9Y320 296 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 SSC5DA1L4H1 1573 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 GOLGA8AA7E2F4 631 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 C19orf81C9J6K1 198 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 USP17L10C9JJH3 530 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 JAG1P78504 1218 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 PPATQ06203 517 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 FANCBQ8NB91 859 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 BRPF3Q9ULD4 1205 aa10.67□□□□□ -0.7
PTPN20-201ENST00000374218 PFKFB2O60825 505 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 CDKL5O76039 1030 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 RTN1Q16799 776 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 LRRC47Q8N1G4 583 aaKnown RBP10.66□□□□□ -0.7
PTPN20-201ENST00000374218 GMCL1P1Q8NEA9 526 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 KIAA1683Q9H0B3 1180 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.66□□□□□ -0.7
PTPN20-201ENST00000374218 ISY1Q9ULR0 285 aaKnown RBP10.66□□□□□ -0.7
PTPN20-201ENST00000374218 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.66□□□□□ -0.7
PTPN20-201ENST00000374218 SNCAIPQ9Y6H5 919 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 F5H6K3 240 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 PARP1P09874 1014 aaKnown RBP10.66□□□□□ -0.7
PTPN20-201ENST00000374218 SLC1A4P43007 532 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 KLRC3Q07444 240 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 TROAPQ12815 778 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 SPP2Q13103 211 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 STK3Q13188 491 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 ME3Q16798 604 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 SHROOM1Q2M3G4 852 aaPredicted RBP10.66□□□□□ -0.7
PTPN20-201ENST00000374218 GPATCH4Q5T3I0 446 aaKnown RBP10.66□□□□□ -0.7
PTPN20-201ENST00000374218 SLFN13Q68D06 897 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 MOB2Q70IA6 237 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 CLEC10AQ8IUN9 316 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 LPAR1Q92633 364 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 LZTS2Q9BRK4 669 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 ELP3Q9H9T3 547 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 SENP2Q9HC62 589 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 TMOD4Q9NZQ9 345 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 MTMR7Q9Y216 660 aa10.66□□□□□ -0.7
PTPN20-201ENST00000374218 SPDYE5A6NIY4 337 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 CD2BP2O95400 341 aaKnown RBP10.65□□□□□ -0.7
PTPN20-201ENST00000374218 HUNKP57058 714 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 ASPRV1Q53RT3 343 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 DCAF4Q8WV16 495 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 VCPKMTQ9H867 229 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 CXCL11O14625 94 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 BACE1P56817 501 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 CCT2P78371 535 aaKnown RBP10.65□□□□□ -0.7
PTPN20-201ENST00000374218 FMR1Q06787 632 aaKnown RBP eCLIP10.65□□□□□ -0.7
PTPN20-201ENST00000374218 CCDC96Q2M329 555 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 CST9Q5W186 159 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 USP17L2Q6R6M4 530 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 SIAH1Q8IUQ4 282 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 ACER1Q8TDN7 264 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 GTF3C6Q969F1 213 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 PASKQ96RG2 1323 aa10.65□□□□□ -0.7
PTPN20-201ENST00000374218 TRIM75PA6NK02 468 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 PPIL2Q13356 520 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 OTUD5Q96G74 571 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 GMCL1Q96IK5 515 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 LLPHQ9BRT6 129 aaKnown RBP10.64□□□□□ -0.71
PTPN20-201ENST00000374218 MYL10Q9BUA6 226 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 KIF3AQ9Y496 699 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 SIPA1L1O43166 1804 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 A0A1W2PRG0 241 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 TMEM88BA6NKF7 163 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 ECE1P42892 770 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 AKAP17AQ02040 695 aaKnown RBP10.64□□□□□ -0.71
PTPN20-201ENST00000374218 GRM4Q14833 912 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 CCDC144CPQ8IYA2 1237 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 INTS4Q96HW7 963 aaKnown RBP10.64□□□□□ -0.71
PTPN20-201ENST00000374218 CLMNQ96JQ2 1002 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 AFG3L2Q9Y4W6 797 aa10.64□□□□□ -0.71
PTPN20-201ENST00000374218 POLR2AP24928 1970 aaKnown RBP10.64□□□□□ -0.71
PTPN20-201ENST00000374218 NDUFB10O96000 172 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 PDHBP11177 359 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 BMP3P12645 472 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 RXRAP19793 462 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 MTMR2Q13614 643 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
PTPN20-201ENST00000374218 CCDC83Q8IWF9 413 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 TRIM22Q8IYM9 498 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 NECAB1Q8N987 351 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 OPTNQ96CV9 577 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 IPO9Q96P70 1041 aaKnown RBP10.63□□□□□ -0.71
PTPN20-201ENST00000374218 ABT1Q9ULW3 272 aaKnown RBP10.63□□□□□ -0.71
PTPN20-201ENST00000374218 HPS5Q9UPZ3 1129 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 SCRN1Q12765 414 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 IKQ13123 557 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-201ENST00000374218 CCDC84Q86UT8 332 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-201ENST00000374218 RAB11FIP4Q86YS3 637 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
PTPN20-201ENST00000374218 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.63□□□□□ -0.71
PTPN20-201ENST00000374218 KLRF2D3W0D1 207 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 WDR46O15213 610 aaKnown RBP10.63□□□□□ -0.71
PTPN20-201ENST00000374218 SNHG28P0DPA3 235 aa10.63□□□□□ -0.71
PTPN20-201ENST00000374218 SMARCA1P28370 1054 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms